RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 ZNF471Q9BX82 626 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-207ENST00000430858 MAP1LC3BQ9GZQ8 125 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 SDF2L1Q9HCN8 221 aa6.84□□□□□ -1.31
HDAC6-207ENST00000430858 IGHV3-16A0A0C4DH30 117 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 GNRH2O43555 120 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 TYMSP04818 313 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
HDAC6-207ENST00000430858 PPT1P50897 306 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 SMUG1Q53HV7 270 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 Q6ZR54 194 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 C8orf49Q96NF6 230 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
HDAC6-207ENST00000430858 M0R2P5 195 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 PEX7O00628 323 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 PAX4O43316 350 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 PFDN1O60925 122 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 GCGP01275 180 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 IGHV3-53P01767 116 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 TPT1P13693 172 aaKnown RBP6.82□□□□□ -1.32
HDAC6-207ENST00000430858 FHITP49789 147 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-207ENST00000430858 DPPA3Q6W0C5 159 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 TMUB2Q71RG4 321 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 LINC00479Q96M42 142 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 TCEAL7Q9BRU2 100 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 ARL2-SNX15V9GYD0 113 aa6.82□□□□□ -1.32
HDAC6-207ENST00000430858 A0A096LPF7 62 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 FHL2Q14192 279 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 SOHLH1Q5JUK2 328 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 TCTE3Q8IZS6 198 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 FAM213BQ8TBF2 198 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 MBD3L1Q8WWY6 194 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 UPK3BQ9BT76 320 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 HHLA3Q9XRX5 114 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
HDAC6-207ENST00000430858 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 NBDYA0A0U1RRE5 68 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 RTL8CO15255 209 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 CRYBA4P53673 196 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 ESRGQ1W209 222 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 LGALSLQ3ZCW2 172 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-207ENST00000430858 C1orf134Q5TEV5 83 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 Q6ZNX1 250 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 Q86TA4 180 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 Q9H8V8 135 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 ZFP30Q9Y2G7 519 aa6.8□□□□□ -1.32
HDAC6-207ENST00000430858 MRPS16Q9Y3D3 137 aaKnown RBP6.8□□□□□ -1.32
HDAC6-207ENST00000430858 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 PAGE4O60829 102 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 H2AFB1P0C5Y9 115 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 SFTA3P0C7M3 94 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 UBE2G1P62253 170 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 MRPL23Q16540 153 aaKnown RBP6.79□□□□□ -1.32
HDAC6-207ENST00000430858 EIF5AL1Q6IS14 154 aaKnown RBP6.79□□□□□ -1.32
HDAC6-207ENST00000430858 COX8CQ7Z4L0 72 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 OR4C5Q8NGB2 326 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 MUC4Q99102 2169 aa6.79□□□□□ -1.32
HDAC6-207ENST00000430858 NACAE9PAV3 2078 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 TRBV6-1A0A0K0K1D8 114 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 CIDEAO60543 219 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 ORM1P02763 201 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 AKR1C3P42330 323 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 RAB5CP51148 216 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 ZNF876PQ49A33 203 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 TTC32Q5I0X7 151 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
HDAC6-207ENST00000430858 PTH2Q96A98 100 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 C9orf85Q96MD7 179 aa6.78□□□□□ -1.32
HDAC6-207ENST00000430858 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 A0A1B0GV50 99 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 C9JCJ5 164 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 LTAP01374 205 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 C1QBP02746 253 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 S100A9P06702 114 aaKnown RBP6.77□□□□□ -1.33
HDAC6-207ENST00000430858 RNASE3P12724 160 aaKnown RBP6.77□□□□□ -1.33
HDAC6-207ENST00000430858 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
HDAC6-207ENST00000430858 FAM162BQ5T6X4 162 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 NEGR1Q7Z3B1 354 aa6.77□□□□□ -1.33
HDAC6-207ENST00000430858 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 TRAV1-1A0A0B4J248 108 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 A0A1W2PPQ1 181 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 K7EQD1 137 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 GYPEP15421 78 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 SRIP30626 198 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 ASIPP42127 132 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 CRIP1P50238 77 aa6.76□□□□□ -1.33
HDAC6-207ENST00000430858 PIK3CD-AS1Q5SR53 167 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms