RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PMCHL2Q9BQD1 86 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 RPS10P5Q9NQ39 176 aa3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CPSF1Q10570 1443 aaKnown RBP3.32□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CHD3Q12873 2000 aaKnown RBP3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SCN3AQ9NY46 2000 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 KIAA1549Q9HCM3 1950 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 PARP14Q460N5 1801 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ERVK-7P63135 1459 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGKV3D-11A0A0A0MRZ8 115 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SLC25A6P12236 298 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 DEFB113Q30KQ7 82 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ZNF791Q3KP31 576 aaPredicted RBP3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TMEM254Q8TBM7 123 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TMEM141Q96I45 108 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SCRT1Q9BWW7 348 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MYLKQ15746 1914 aa3.31□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 F8W1H4 67 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CYB5AP00167 134 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 GYPAP02724 150 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ASAH2BP0C7U1 165 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ALKAL2Q6UX46 152 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ZCCHC23Q6ZST2 131 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 S100A13Q99584 98 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 HIGD2AQ9BW72 106 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 R4GN34 69 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MGAMO43451 1857 aa3.3□□□□□ -1.88
PTP4A1P1-201ENST00000420539 PLA2R1Q13018 1463 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SCAPERQ9BY12 1400 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SBF2Q86WG5 1849 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGKV1D-17A0A075B6S4 117 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TMSB15BA0A087X1C1 80 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 hADV29S1A0JD25 119 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ODF3BA8MYP8 253 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 PSCAO43653 123 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGKCP01834 107 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 P0C880 135 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TRAPPC2P0DI81 140 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TRAPPC2BP0DI82 140 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MDKP21741 143 aaPredicted RBP3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 COMMD6Q7Z4G1 85 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 HMGN2P46Q86SG4 172 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 REG4Q9BYZ8 158 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MARF1Q9Y4F3 1742 aaKnown RBP3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 NACAE9PAV3 2078 aa3.29□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CCDC88BA6NC98 1476 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 DOCK1Q14185 1865 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MUC4Q99102 2169 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CASZ1Q86V15 1759 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TRAV10A0A0B4J240 114 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 PIGBOS1A0A0B4J2F0 54 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 SFT2D2O95562 160 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CCKP06307 115 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 CBLN1P23435 193 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 UBE2G1P62253 170 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 RHOHQ15669 191 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 Q8TAT8 98 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 TSLPQ969D9 159 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 C20orf78Q9BR46 151 aa3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 DIDO1Q9BTC0 2240 aaKnown RBP3.28□□□□□ -1.88
PTP4A1P1-201ENST00000420539 COL24A1Q17RW2 1714 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TRAV2A0A0B4J234 112 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TCRBV4S1A1TA0A5B7 111 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 IGLC7A0M8Q6 106 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 PRB4P10163 310 aaPredicted RBP3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 Q1T7F1 81 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 UQCR10Q9UDW1 63 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 LHFPL6Q9Y693 200 aa3.27□□□□□ -1.89
PTP4A1P1-201ENST00000420539 PSME4Q14997 1843 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TRAV17A0A0B4J275 112 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 NUPR1O60356 82 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 HINT1P49773 126 aaPredicted RBP3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 ERHP84090 104 aaKnown RBP3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 SLC48A1Q6P1K1 146 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 C9orf163Q8N9P6 203 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 S100A16Q96FQ6 103 aaKnown RBP3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 LINC00474Q9P2X8 69 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 LRRIQ1Q96JM4 1722 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TOPAZ1Q8N9V7 1692 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 DAPK1P53355 1430 aa3.26□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TRPM7Q96QT4 1865 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 IFT140Q96RY7 1462 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 TRAV12-1A0A0B4J245 112 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 ATOX1O00244 68 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 APOC3P02656 99 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 CXCL8P10145 99 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 FAUP35544 74 aaKnown RBP3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 RPL7L1Q6DKI1 246 aaKnown RBP3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 EML5Q05BV3 1969 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 STRCQ7RTU9 1775 aa3.25□□□□□ -1.89
PTP4A1P1-201ENST00000420539 LAMC3Q9Y6N6 1575 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms