RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 TP53TG3Q9ULZ0 132 aa10.39□□□□□ -0.75
CHD1-202ENST00000414220 TRAV34A0A0B4J273 112 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 IFNA1P01562 189 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 IGLV2-11P01706 119 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 AKR1C3P42330 323 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 TXNDC17Q9BRA2 123 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
CHD1-202ENST00000414220 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 FABP5P3A8MUU1 101 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 SLAQ13239 276 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 Q6ZQT7 251 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 LINC00479Q96M42 142 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 C8orf49Q96NF6 230 aa10.37□□□□□ -0.75
CHD1-202ENST00000414220 NUDT3O95989 172 aa10.36□□□□□ -0.75
CHD1-202ENST00000414220 Q86TA4 180 aa10.36□□□□□ -0.75
CHD1-202ENST00000414220 C9orf62Q8N4C0 152 aa10.36□□□□□ -0.75
CHD1-202ENST00000414220 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
CHD1-202ENST00000414220 MDFICQ9P1T7 246 aa10.36□□□□□ -0.75
CHD1-202ENST00000414220 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 M0R2P5 195 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 GNRH2O43555 120 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 TYMSP04818 313 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 RNF212Q495C1 297 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 MRPL16Q9NX20 251 aaKnown RBP10.35□□□□□ -0.75
CHD1-202ENST00000414220 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
CHD1-202ENST00000414220 DYNC2H1Q8NCM8 4307 aaKnown RBP10.34□□□□□ -0.75
CHD1-202ENST00000414220 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
CHD1-202ENST00000414220 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
CHD1-202ENST00000414220 H3BNG1 76 aa10.34□□□□□ -0.75
CHD1-202ENST00000414220 S100A4P26447 101 aaKnown RBP10.34□□□□□ -0.75
CHD1-202ENST00000414220 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
CHD1-202ENST00000414220 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
CHD1-202ENST00000414220 CCL18P55774 89 aa10.34□□□□□ -0.75
CHD1-202ENST00000414220 RASL10AQ92737 203 aa10.34□□□□□ -0.75
CHD1-202ENST00000414220 ORM1P02763 201 aa10.33□□□□□ -0.76
CHD1-202ENST00000414220 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
CHD1-202ENST00000414220 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
CHD1-202ENST00000414220 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
CHD1-202ENST00000414220 TRGV4A0A0C4DH28 118 aa10.32□□□□□ -0.76
CHD1-202ENST00000414220 LTAP01374 205 aa10.32□□□□□ -0.76
CHD1-202ENST00000414220 COX8CQ7Z4L0 72 aa10.32□□□□□ -0.76
CHD1-202ENST00000414220 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
CHD1-202ENST00000414220 A0A0J9YY99 117 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 SCO2A0A1W2PP80 73 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 PDE6DO43924 150 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 CIDEAO60543 219 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 HOXA5P20719 270 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 ASIPP42127 132 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 BAGE2Q86Y30 109 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 OR4C5Q8NGB2 326 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 SACSQ9NZJ4 4579 aa10.31□□□□□ -0.76
CHD1-202ENST00000414220 TRAV4A0A0B4J268 109 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 B4DEV8 164 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 C9JCJ5 164 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 PAX4O43316 350 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 CCL20P78556 96 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 ZC2HC1AQ96GY0 325 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
CHD1-202ENST00000414220 SH2D1AO60880 128 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 MEF2BQ02080 365 aaPredicted RBP10.29□□□□□ -0.76
CHD1-202ENST00000414220 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 PCNPQ8WW12 178 aaKnown RBP10.29□□□□□ -0.76
CHD1-202ENST00000414220 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
CHD1-202ENST00000414220 BCL2P10415 239 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 ZNF674Q2M3X9 581 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 PTH2Q96A98 100 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 MED9Q9NWA0 146 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 RYR3Q15413 4870 aa10.28□□□□□ -0.76
CHD1-202ENST00000414220 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 M0R036 132 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 RPL35P42766 123 aaKnown RBP10.27□□□□□ -0.77
CHD1-202ENST00000414220 CRIP1P50238 77 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
CHD1-202ENST00000414220 CRYBA4P53673 196 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 FHL2Q14192 279 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 MRPL23Q16540 153 aaKnown RBP10.27□□□□□ -0.77
CHD1-202ENST00000414220 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 C9orf85Q96MD7 179 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 BIN3Q9NQY0 253 aa10.27□□□□□ -0.77
CHD1-202ENST00000414220 RYR2Q92736 4967 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 KRBOX1C9JBD0 128 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 PIK3CD-AS1Q5SR53 167 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 LCE2DQ5TA82 110 aaPredicted RBP10.26□□□□□ -0.77
CHD1-202ENST00000414220 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 DAZAP1Q96EP5 407 aaKnown RBP10.26□□□□□ -0.77
CHD1-202ENST00000414220 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
CHD1-202ENST00000414220 A8MWV9 139 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 SFTA3P0C7M3 94 aa10.25□□□□□ -0.77
CHD1-202ENST00000414220 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms