RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 ITLN2Q8WWU7 325 aaPredicted RBP6.89□□□□□ -1.31
SIK3-202ENST00000413553 FAM208BQ5VWN6 2430 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 SVEP1Q4LDE5 3571 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 TRBV7-3A0A075B6L6 115 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
SIK3-202ENST00000413553 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 FANCD2OSQ96PS1 177 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 SMAD5-AS1Q9Y6J3 95 aa6.89□□□□□ -1.31
SIK3-202ENST00000413553 IGHG4P01861 327 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 FOXI1Q12951 378 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 ZNF418Q8TF45 676 aaPredicted RBP6.88□□□□□ -1.31
SIK3-202ENST00000413553 ASH1LQ9NR48 2969 aaKnown RBP6.88□□□□□ -1.31
SIK3-202ENST00000413553 FLNCQ14315 2725 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 CRYBA4P53673 196 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 SPANXN1Q5VSR9 72 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 RNF5Q99942 180 aa6.88□□□□□ -1.31
SIK3-202ENST00000413553 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 F8VRH5 84 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
SIK3-202ENST00000413553 SPINK8P0C7L1 97 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 PSMB2P49721 201 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 SRSF2Q01130 221 aaKnown RBP6.87□□□□□ -1.31
SIK3-202ENST00000413553 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 C1QTNF4Q9BXJ3 329 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 CSMD1Q96PZ7 3565 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 IGKV3D-20A0A0C4DH25 116 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 H7C1H1 209 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 SCGB2A1O75556 95 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 MORN3Q6PF18 240 aaPredicted RBP6.87□□□□□ -1.31
SIK3-202ENST00000413553 C8orf86Q6ZUL3 223 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 NRACQ8N912 160 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
SIK3-202ENST00000413553 SPG11Q96JI7 2443 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 IGHV3OR16-13A0A075B7E8 117 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 IGHV3-74A0A0B4J1X5 117 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 LINC01549A6NIU2 74 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 GLMPQ8WWB7 406 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 SCGB3A1Q96QR1 104 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
SIK3-202ENST00000413553 MAP1AP78559 2803 aaPredicted RBP6.86□□□□□ -1.31
SIK3-202ENST00000413553 SRSF9Q13242 221 aaKnown RBP eCLIP6.86□□□□□ -1.31
SIK3-202ENST00000413553 UBTD1Q9HAC8 227 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 A6NJY4 79 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 LY6HO94772 140 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
SIK3-202ENST00000413553 NDPQ00604 133 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 KLRD1Q13241 179 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 C5orf64Q2M2E5 130 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
SIK3-202ENST00000413553 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
SIK3-202ENST00000413553 USP9XQ93008 2570 aaPredicted RBP6.86□□□□□ -1.31
SIK3-202ENST00000413553 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 LY6LH3BQJ8 138 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 C19orf84I3L1E1 186 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 CTSGP08311 255 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 CFAP126Q5VTH2 177 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 PTH2Q96A98 100 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 HIF1ANQ9NWT6 349 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 DPM3Q9P2X0 92 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 H3BVH4 76 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 TGFAP01135 160 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
SIK3-202ENST00000413553 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 ZNF48Q96MX3 618 aaPredicted RBP6.85□□□□□ -1.31
SIK3-202ENST00000413553 PRADC1Q9BSG0 188 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 LRRK2Q5S007 2527 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 DCHS2Q6V1P9 2916 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 MED13LQ71F56 2210 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 PRSS47A8MTI9 375 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 J3KRW8 73 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 CDIP1Q9H305 208 aa6.85□□□□□ -1.31
SIK3-202ENST00000413553 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 ZFP2Q6ZN57 461 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 Q6ZQT7 251 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 AGPAT4-IT1Q9H0P7 198 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 DOPEY1Q5JWR5 2465 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 TRAV12-1A0A0B4J245 112 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 XGP55808 180 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 ATP6V0E2Q8NHE4 81 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 PSMG3-AS1Q96PY0 264 aa6.84□□□□□ -1.31
SIK3-202ENST00000413553 LINC01619G3V211 115 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 M0R381 172 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 SPRY2O43597 315 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 TSPAN13O95857 204 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 FHL3Q13643 280 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 ORMDL2Q53FV1 153 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 Q6ZUT4 128 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 NPBQ8NG41 125 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 PLEKHB2Q96CS7 222 aa6.83□□□□□ -1.32
SIK3-202ENST00000413553 TIMD4Q96H15 378 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms