RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ZFAND2AQ8N6M9 145 aa7.47□□□□□ -1.21
MSH2-202ENST00000406134 C18orf15Q96N68 181 aa7.47□□□□□ -1.21
MSH2-202ENST00000406134 FCER1GP30273 86 aa7.47□□□□□ -1.21
MSH2-202ENST00000406134 SMAGPQ0VAQ4 97 aa7.47□□□□□ -1.21
MSH2-202ENST00000406134 EEF1AKMT3Q96AZ1 226 aa7.47□□□□□ -1.21
MSH2-202ENST00000406134 SPRY2O43597 315 aa7.46□□□□□ -1.21
MSH2-202ENST00000406134 LEPP41159 167 aa7.46□□□□□ -1.21
MSH2-202ENST00000406134 CREBBPQ92793 2442 aa7.46□□□□□ -1.21
MSH2-202ENST00000406134 KIR3DS1Q14943 382 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 PRORYQ9H606 182 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 RAB9AP51151 201 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 BRD3OSQ6XYD6 125 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 Q8N8P6 123 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 MAP1LC3AQ9H492 121 aa7.46□□□□□ -1.22
MSH2-202ENST00000406134 TRAV26-1A0A087WT03 109 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 IGHV4-61A0A0C4DH41 118 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 IGHV4-38-2P0DP08 117 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 TMEM158Q8WZ71 300 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 TRAV41A0A0B4J266 112 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 APRG1Q8IVJ8 170 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 OR2K2Q8NGT1 345 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 MOB4Q9Y3A3 225 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 IGSF10Q6WRI0 2623 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 C7orf71A4D174 169 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 SIVA1O15304 175 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 CRYBA4P53673 196 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
MSH2-202ENST00000406134 NOTCH3Q9UM47 2321 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 IGHV1-69DA0A0B4J2H0 117 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 IGHV1-69P01742 117 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 CFHR3Q02985 330 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 METTL26Q96S19 204 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 KLK15Q9H2R5 256 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 PHLDA1Q8WV24 401 aaPredicted RBP7.44□□□□□ -1.22
MSH2-202ENST00000406134 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
MSH2-202ENST00000406134 HIF1ANQ9NWT6 349 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 FAM223BA6NKX1 122 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 BRI3O95415 125 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 SEC11AP67812 179 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 ATP5G2Q06055 141 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 FAM223AQ8IWN6 122 aa7.44□□□□□ -1.22
MSH2-202ENST00000406134 SCGB2A1O75556 95 aa7.43□□□□□ -1.22
MSH2-202ENST00000406134 GNLYP22749 145 aa7.43□□□□□ -1.22
MSH2-202ENST00000406134 RASL10AQ92737 203 aa7.43□□□□□ -1.22
MSH2-202ENST00000406134 TRAV40A0A0B4J280 105 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 H3BVH4 76 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 MAPKAPK5-AS1Q8N8E1 139 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 OR9G4Q8NGQ1 327 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 AGRNO00468 2067 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 A6NDX4 124 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 H3BRM9 83 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
MSH2-202ENST00000406134 PTPN13Q12923 2485 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 F6UB75 175 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 AVPP01185 164 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 IGHG2P01859 326 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
MSH2-202ENST00000406134 HSD52Q0P140 79 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 POM121L12Q8N7R1 296 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 CSPG4Q6UVK1 2322 aa7.42□□□□□ -1.22
MSH2-202ENST00000406134 TMEM8BA6NDV4 472 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 IGLV1-40P01703 118 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 SMIM17P0DL12 118 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 ARL3P36405 182 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 NMUP48645 174 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 FXYD2P54710 66 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 SHISA2Q6UWI4 295 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 A1L4Q6 167 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 LINC00315P59091 139 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 BLCAPP62952 87 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 C9orf139Q6ZV77 190 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 NDUFA4O00483 81 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 AZU1P20160 251 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 CKS1BP61024 79 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 C10orf105Q8TEF2 133 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
MSH2-202ENST00000406134 FOXC2Q99958 501 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 MRPL35Q9NZE8 188 aaKnown RBP7.41□□□□□ -1.22
MSH2-202ENST00000406134 PEF1Q9UBV8 284 aaKnown RBP7.41□□□□□ -1.22
MSH2-202ENST00000406134 LENEPQ9Y5L5 61 aa7.41□□□□□ -1.22
MSH2-202ENST00000406134 IGKCP01834 107 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 KIF25-AS1Q9Y6Z4 181 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 PKD1L2Q7Z442 2459 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 NXPH4O95158 308 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 HLA-DRB4P13762 266 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 GTSCR1Q86UQ5 136 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.22
MSH2-202ENST00000406134 TRBV25-1A0A075B6N4 114 aa7.4□□□□□ -1.23
MSH2-202ENST00000406134 K7EMI3 77 aa7.4□□□□□ -1.23
MSH2-202ENST00000406134 LAGE3Q14657 143 aa7.4□□□□□ -1.23
MSH2-202ENST00000406134 OR4X2Q8NGF9 303 aa7.4□□□□□ -1.23
MSH2-202ENST00000406134 USP9XQ93008 2570 aaPredicted RBP7.4□□□□□ -1.23
MSH2-202ENST00000406134 IGHV4-30-2A0A087WSY4 118 aa7.39□□□□□ -1.23
MSH2-202ENST00000406134 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 295.7 ms