RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 FAM223AQ8IWN6 122 aa19.49■□□□□ 0.71
COL13A1-203ENST00000398969 C20orf173Q96LM9 149 aa19.49■□□□□ 0.71
COL13A1-203ENST00000398969 HIGD1BQ9P298 99 aa19.49■□□□□ 0.71
COL13A1-203ENST00000398969 C9orf139Q6ZV77 190 aa19.49■□□□□ 0.71
COL13A1-203ENST00000398969 RAB37Q96AX2 223 aa19.49■□□□□ 0.71
COL13A1-203ENST00000398969 H3BVH4 76 aa19.48■□□□□ 0.71
COL13A1-203ENST00000398969 K7EP34 96 aa19.48■□□□□ 0.71
COL13A1-203ENST00000398969 TM4SF20Q53R12 229 aa19.48■□□□□ 0.71
COL13A1-203ENST00000398969 GTSCR1Q86UQ5 136 aa19.48■□□□□ 0.71
COL13A1-203ENST00000398969 ZC2HC1BQ5TFG8 222 aa19.47■□□□□ 0.71
COL13A1-203ENST00000398969 LENEPQ9Y5L5 61 aa19.47■□□□□ 0.71
COL13A1-203ENST00000398969 IGHV3OR16-10A0A075B7F0 116 aa19.46■□□□□ 0.71
COL13A1-203ENST00000398969 IGF1P05019 195 aa19.46■□□□□ 0.71
COL13A1-203ENST00000398969 ARL3P36405 182 aa19.46■□□□□ 0.71
COL13A1-203ENST00000398969 CRIP2P52943 208 aaPredicted RBP19.46■□□□□ 0.71
COL13A1-203ENST00000398969 MYOZ3Q8TDC0 251 aa19.46■□□□□ 0.71
COL13A1-203ENST00000398969 CCL19Q99731 98 aa19.46■□□□□ 0.71
COL13A1-203ENST00000398969 CHAC1Q9BUX1 264 aa19.45■□□□□ 0.7
COL13A1-203ENST00000398969 UNQ9165/PRO28630Q6UXU0 137 aa19.45■□□□□ 0.7
COL13A1-203ENST00000398969 SPOCK3Q9BQ16 436 aa19.45■□□□□ 0.7
COL13A1-203ENST00000398969 MRPL35Q9NZE8 188 aaKnown RBP19.45■□□□□ 0.7
COL13A1-203ENST00000398969 MYO18BQ8IUG5 2567 aa19.45■□□□□ 0.7
COL13A1-203ENST00000398969 GPHB5Q86YW7 130 aa19.44■□□□□ 0.7
COL13A1-203ENST00000398969 MRAP2Q96G30 205 aa19.44■□□□□ 0.7
COL13A1-203ENST00000398969 TMEM160Q9NX00 188 aa19.44■□□□□ 0.7
COL13A1-203ENST00000398969 TRAV40A0A0B4J280 105 aa19.44■□□□□ 0.7
COL13A1-203ENST00000398969 GCSHP23434 173 aa19.44■□□□□ 0.7
COL13A1-203ENST00000398969 SRSF1Q07955 248 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL13A1-203ENST00000398969 A0A1W2PPM0 123 aa19.43■□□□□ 0.7
COL13A1-203ENST00000398969 TRBV12-3P01733 135 aa19.43■□□□□ 0.7
COL13A1-203ENST00000398969 VPS25Q9BRG1 176 aa19.43■□□□□ 0.7
COL13A1-203ENST00000398969 TRBV25-1A0A075B6N4 114 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 J3KRW8 73 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 HLA-DRB4P13762 266 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 FXYD2P54710 66 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 ZNF843Q8N446 348 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 ZFAND2AQ8N6M9 145 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 HLA-DRB4X5D2U9 266 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 LINC00477Q96M19 166 aa19.42■□□□□ 0.7
COL13A1-203ENST00000398969 K7ERU9 68 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 SELENOKQ9Y6D0 94 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 ZNF462Q96JM2 2506 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 A0A087WX48 190 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 SMIM13P0DJ93 91 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 SMIM2Q9BVW6 85 aa19.41■□□□□ 0.7
COL13A1-203ENST00000398969 IGHV1-69DA0A0B4J2H0 117 aa19.4■□□□□ 0.7
COL13A1-203ENST00000398969 SOCS3O14543 225 aa19.4■□□□□ 0.7
COL13A1-203ENST00000398969 IGHV1-69P01742 117 aa19.4■□□□□ 0.7
COL13A1-203ENST00000398969 BRD3OSQ6XYD6 125 aa19.4■□□□□ 0.7
COL13A1-203ENST00000398969 NDUFA4O00483 81 aa19.4■□□□□ 0.7
COL13A1-203ENST00000398969 OR10J6PQ8NGY7 276 aa19.39■□□□□ 0.69
COL13A1-203ENST00000398969 SPCS1Q9Y6A9 102 aa19.39■□□□□ 0.69
COL13A1-203ENST00000398969 OVOL1O14753 267 aa19.39■□□□□ 0.69
COL13A1-203ENST00000398969 TRAV21A0A0B4J279 112 aa19.38■□□□□ 0.69
COL13A1-203ENST00000398969 M0R381 172 aa19.38■□□□□ 0.69
COL13A1-203ENST00000398969 DEFB1P60022 68 aa19.37■□□□□ 0.69
COL13A1-203ENST00000398969 PIMREGQ9BSJ6 248 aa19.37■□□□□ 0.69
COL13A1-203ENST00000398969 SPRY2O43597 315 aa19.37■□□□□ 0.69
COL13A1-203ENST00000398969 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.36■□□□□ 0.69
COL13A1-203ENST00000398969 SAP30O75446 220 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 SAMD5Q5TGI4 173 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 MAPKAPK5-AS1Q8N8E1 139 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 OR5A1Q8NGJ0 315 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 PLNP26678 52 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 C10orf105Q8TEF2 133 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 RASL10AQ92737 203 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 TM2D2Q9BX73 214 aa19.36■□□□□ 0.69
COL13A1-203ENST00000398969 FABP2P12104 132 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 ATP5J2P56134 94 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 SPG11Q96JI7 2443 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 EPG5Q9HCE0 2579 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 S100A4P26447 101 aaKnown RBP19.35■□□□□ 0.69
COL13A1-203ENST00000398969 ASIPP42127 132 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 SUMO2P61956 95 aaKnown RBP19.35■□□□□ 0.69
COL13A1-203ENST00000398969 CEND1Q8N111 149 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 MEGF9Q9H1U4 602 aa19.35■□□□□ 0.69
COL13A1-203ENST00000398969 IGHV4-61A0A0C4DH41 118 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 K7ERJ3 54 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 FAM19A4Q96LR4 140 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 DPH3P1Q9H4G8 78 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 ABCA2Q9BZC7 2435 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 TRAV12-1A0A0B4J245 112 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 NDUFS8O00217 210 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 ANXA2RQ3ZCQ2 193 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 ORMDL2Q53FV1 153 aa19.34■□□□□ 0.69
COL13A1-203ENST00000398969 PHLDA1Q8WV24 401 aaPredicted RBP19.34■□□□□ 0.69
COL13A1-203ENST00000398969 VPS13CQ709C8 3753 aa19.33■□□□□ 0.69
COL13A1-203ENST00000398969 IGHV3-11P01762 117 aa19.33■□□□□ 0.68
COL13A1-203ENST00000398969 C14orf178Q8N769 122 aaPredicted RBP19.33■□□□□ 0.68
COL13A1-203ENST00000398969 C20orf78Q9BR46 151 aa19.33■□□□□ 0.68
COL13A1-203ENST00000398969 PHLDA3Q9Y5J5 127 aa19.33■□□□□ 0.68
COL13A1-203ENST00000398969 ZFHX3Q15911 3703 aa19.33■□□□□ 0.68
COL13A1-203ENST00000398969 LY6EQ16553 131 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 CLEC2AQ6UVW9 174 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 RPL39LQ96EH5 51 aaKnown RBP19.32■□□□□ 0.68
COL13A1-203ENST00000398969 USMG5Q96IX5 58 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 F8VRH5 84 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 H7C1H1 209 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 BRI3O95415 125 aa19.32■□□□□ 0.68
COL13A1-203ENST00000398969 TOMM6Q96B49 74 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms