RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CYSLTR1Q9Y271 337 aa18.5■□□□□ 0.55
CSNK1E-203ENST00000396832 TRGV3P03979 118 aa18.49■□□□□ 0.55
CSNK1E-203ENST00000396832 MYMXA0A1B0GTQ4 84 aa18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 SPRY2O43597 315 aa18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 SPINK8P0C7L1 97 aa18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 PGPEP1Q9NXJ5 209 aa18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 SMCPP49901 116 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 FOXC1Q12948 553 aa18.48■□□□□ 0.55
CSNK1E-203ENST00000396832 J3KRW8 73 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 ECSCRQ19T08 205 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 CFAP126Q5VTH2 177 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 CTSGP08311 255 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 NFE4Q86UQ8 179 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 UFC1Q9Y3C8 167 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 OR11H12B2RN74 326 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 OR11H1Q8NG94 326 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 OR11H2Q8NH07 326 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 ZNF418Q8TF45 676 aaPredicted RBP18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 RNF5Q99942 180 aa18.47■□□□□ 0.55
CSNK1E-203ENST00000396832 NRACQ8N912 160 aa18.46■□□□□ 0.55
CSNK1E-203ENST00000396832 SPTAN1Q13813 2472 aaKnown RBP18.46■□□□□ 0.55
CSNK1E-203ENST00000396832 MT-ATP8P03928 68 aa18.45■□□□□ 0.54
CSNK1E-203ENST00000396832 LINC01619G3V211 115 aa18.45■□□□□ 0.54
CSNK1E-203ENST00000396832 H7C1H1 209 aa18.45■□□□□ 0.54
CSNK1E-203ENST00000396832 ATP6V0E2Q8NHE4 81 aa18.44■□□□□ 0.54
CSNK1E-203ENST00000396832 DLX4Q92988 240 aaPredicted RBP18.44■□□□□ 0.54
CSNK1E-203ENST00000396832 F8VRH5 84 aa18.44■□□□□ 0.54
CSNK1E-203ENST00000396832 IGF2-ASQ6U949 168 aa18.44■□□□□ 0.54
CSNK1E-203ENST00000396832 SFTA2Q6UW10 78 aa18.44■□□□□ 0.54
CSNK1E-203ENST00000396832 IGKV3D-20A0A0C4DH25 116 aa18.43■□□□□ 0.54
CSNK1E-203ENST00000396832 NBL1P41271 181 aa18.43■□□□□ 0.54
CSNK1E-203ENST00000396832 FHL3Q13643 280 aa18.43■□□□□ 0.54
CSNK1E-203ENST00000396832 GLMPQ8WWB7 406 aa18.43■□□□□ 0.54
CSNK1E-203ENST00000396832 LGALS1P09382 135 aaKnown RBP18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 PSMB2P49721 201 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 CDSNQ15517 529 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 NPBQ8NG41 125 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 C11orf21Q9P2W6 132 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 LINC01549A6NIU2 74 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 C15orf32Q32M92 178 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 KLK15Q9H2R5 256 aa18.42■□□□□ 0.54
CSNK1E-203ENST00000396832 LOC107984156A0A0G2JMH3 177 aa18.41■□□□□ 0.54
CSNK1E-203ENST00000396832 ARL17AQ8IVW1 177 aa18.41■□□□□ 0.54
CSNK1E-203ENST00000396832 PTH2Q96A98 100 aa18.41■□□□□ 0.54
CSNK1E-203ENST00000396832 ZNF48Q96MX3 618 aaPredicted RBP18.41■□□□□ 0.54
CSNK1E-203ENST00000396832 TRAV12-1A0A0B4J245 112 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 XGP55808 180 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 ZFP2Q6ZN57 461 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 Q6ZUT4 128 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 CLEC3BP05452 202 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 VMO1Q7Z5L0 202 aa18.4■□□□□ 0.54
CSNK1E-203ENST00000396832 TMEM78Q5T7P6 136 aa18.39■□□□□ 0.53
CSNK1E-203ENST00000396832 OR11H6Q8NGC7 330 aa18.39■□□□□ 0.53
CSNK1E-203ENST00000396832 RAXQ9Y2V3 346 aa18.39■□□□□ 0.53
CSNK1E-203ENST00000396832 DEFB104AQ8WTQ1 72 aa18.39■□□□□ 0.53
CSNK1E-203ENST00000396832 LY6G5BQ8NDX9 201 aa18.38■□□□□ 0.53
CSNK1E-203ENST00000396832 IGHV7-81A0A0B4J1V7 117 aa18.37■□□□□ 0.53
CSNK1E-203ENST00000396832 SCGB3A1Q96QR1 104 aa18.37■□□□□ 0.53
CSNK1E-203ENST00000396832 G3V318 75 aa18.37■□□□□ 0.53
CSNK1E-203ENST00000396832 CLEC19AQ6UXS0 136 aa18.37■□□□□ 0.53
CSNK1E-203ENST00000396832 A6NJY4 79 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 LINC01548A6NM66 108 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 TSPAN13O95857 204 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 IGHV7-4-1A0A0J9YVY3 117 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 CARD19Q96LW7 228 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 PRADC1Q9BSG0 188 aa18.36■□□□□ 0.53
CSNK1E-203ENST00000396832 SRSF9Q13242 221 aaKnown RBP eCLIP18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 SPANXN1Q5VSR9 72 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 SCGB1D4Q6XE38 83 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 AGPAT4-IT1Q9H0P7 198 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 ZNF815PA8K554 130 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 ODF3BA8MYP8 253 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 DEFB1P60022 68 aa18.35■□□□□ 0.53
CSNK1E-203ENST00000396832 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 NEXN-AS1Q8NBZ9 246 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 RNF183Q96D59 192 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 SMIM2Q9BVW6 85 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 LINC00527Q9UJ94 153 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 UBE2D1P51668 147 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 PLEKHB2Q96CS7 222 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 TIMD4Q96H15 378 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 VKORC1Q9BQB6 163 aa18.34■□□□□ 0.53
CSNK1E-203ENST00000396832 PPDPFLQ8WWR9 84 aa18.33■□□□□ 0.53
CSNK1E-203ENST00000396832 CCL21O00585 134 aa18.33■□□□□ 0.52
CSNK1E-203ENST00000396832 ATP6V0E1O15342 81 aa18.33■□□□□ 0.52
CSNK1E-203ENST00000396832 PRTN3P24158 256 aa18.33■□□□□ 0.52
CSNK1E-203ENST00000396832 ZFP36P26651 326 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-203ENST00000396832 H3BVH4 76 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 IGF1P05019 195 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 GATA3P23771 443 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 BUB3O43684 328 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 TOMM6Q96B49 74 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 ERG28Q9UKR5 140 aa18.32■□□□□ 0.52
CSNK1E-203ENST00000396832 UBE2D3P61077 147 aa18.31■□□□□ 0.52
CSNK1E-203ENST00000396832 UBE2D2P62837 147 aa18.31■□□□□ 0.52
CSNK1E-203ENST00000396832 RBAKDNA6NC62 111 aa18.31■□□□□ 0.52
CSNK1E-203ENST00000396832 TEN1Q86WV5 123 aa18.31■□□□□ 0.52
CSNK1E-203ENST00000396832 SLC25A16P16260 332 aa18.3■□□□□ 0.52
CSNK1E-203ENST00000396832 ORMDL2Q53FV1 153 aa18.3■□□□□ 0.52
CSNK1E-203ENST00000396832 ZFAND3Q9H8U3 227 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms