RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 COX7A2P2O60397 106 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 APOMO95445 188 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 IGHV3-48P01763 117 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 ZNF491Q8N8L2 437 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 BBC3Q96PG8 261 aaPredicted RBP4.13□□□□□ -1.75
VPS41-203ENST00000395969 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 HHLA3Q9XRX5 114 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 DOPEY2Q9Y3R5 2298 aa4.13□□□□□ -1.75
VPS41-203ENST00000395969 SPTBN1Q01082 2364 aaKnown RBP4.13□□□□□ -1.75
VPS41-203ENST00000395969 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 TRAV2A0A0B4J234 112 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 PGPA6NDG6 321 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 LINC01546A6NGU7 62 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 H3BVH4 76 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 K7EMT4 169 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 IGLV2-11P01706 119 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 HBDP02042 147 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 TCRAP04437 139 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 ARMS2P0C7Q2 107 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 FOXI1Q12951 378 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 GAGE5Q13069 117 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 GAGE6Q13070 117 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 RIGQ13278 110 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 GAGE13Q4V321 117 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 Q86TA4 180 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 IFI27L1Q96BM0 104 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 MRPL36Q9P0J6 103 aaKnown RBP4.12□□□□□ -1.75
VPS41-203ENST00000395969 LENEPQ9Y5L5 61 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 CR1P17927 2039 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 ANKRD11Q6UB99 2663 aaPredicted RBP4.12□□□□□ -1.75
VPS41-203ENST00000395969 TRBV25-1A0A075B6N4 114 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 A8MTW9 85 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 LYNX1G3V0Z9 82 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 LYNX1P0DP58 116 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 XGP55808 180 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 TAL2Q16559 108 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 FOXC2Q99958 501 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 PPDPFQ9H3Y8 114 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 UBR5O95071 2799 aaPredicted RBP4.12□□□□□ -1.75
VPS41-203ENST00000395969 IGHV4-61A0A0C4DH41 118 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 NDUFS7O75251 213 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 EVI2AP22794 236 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 COL8A1P27658 744 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 SAA4P35542 130 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 Q6ZUT4 128 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 LINC00305Q7Z4B0 112 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 DKK2Q9UBU2 259 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 APC2O95996 2303 aa4.12□□□□□ -1.75
VPS41-203ENST00000395969 ATMQ13315 3056 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 TRBV19A0A075B6N1 114 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 LINC01548A6NM66 108 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CNTFRP26992 372 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 NDPQ00604 133 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 KLF17Q5JT82 389 aaPredicted RBP4.11□□□□□ -1.75
VPS41-203ENST00000395969 Q6AWC8 147 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 C17orf77Q96MU5 243 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 PCNX1Q96RV3 2341 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CSMD1Q96PZ7 3565 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 LOC107984156A0A0G2JMH3 177 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 D6R8Y8 96 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 LGALS9O00182 355 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CTSGP08311 255 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 DEFB113Q30KQ7 82 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 C12orf74Q32Q52 190 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CFAP126Q5VTH2 177 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 Q6YL49 198 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 ARL17AQ8IVW1 177 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 STHQ8IWL8 128 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 CIARTQ8N365 385 aaPredicted RBP4.11□□□□□ -1.75
VPS41-203ENST00000395969 DUX5Q96PT3 197 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 ODF3Q96PU9 254 aa4.11□□□□□ -1.75
VPS41-203ENST00000395969 SLC25A39Q9BZJ4 359 aaPredicted RBP4.11□□□□□ -1.75
VPS41-203ENST00000395969 CLPSL1A2RUU4 121 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 IGHG4P01861 327 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 SMCPP49901 116 aaPredicted RBP4.1□□□□□ -1.75
VPS41-203ENST00000395969 RRN3P1Q2M238 152 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 Q9H3A6 140 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 FBXL15Q9H469 300 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 HIGD1AQ9Y241 93 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 ITPR1Q14643 2758 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
VPS41-203ENST00000395969 MED13LQ71F56 2210 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 KALRNO60229 2985 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 LINC01619G3V211 115 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 COX6B1P14854 86 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 FAM104BQ5XKR9 115 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
VPS41-203ENST00000395969 NRGNQ92686 78 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 PRELID3AQ96N28 172 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 KMT2BQ9UMN6 2715 aaPredicted RBP4.1□□□□□ -1.75
VPS41-203ENST00000395969 IGHV4-30-2A0A087WSY4 118 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 NDUFA4O00483 81 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 SOCS3O14543 225 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms