RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NHLRC2Q8NBF2 726 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 ZC2HC1AQ96GY0 325 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 DERL1Q9BUN8 251 aa14.08□□□□□ -0.15
SNCA-203ENST00000394986 TRGV11A0A075B6L2 103 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 IGHV4-4A0A075B6R2 117 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 TRGV1A0A0A0MS02 117 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 MRPL16Q9NX20 251 aaKnown RBP14.07□□□□□ -0.16
SNCA-203ENST00000394986 ZFP30Q9Y2G7 519 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 ALMS1Q8TCU4 4167 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 CRIP1P50238 77 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 MEF2BQ02080 365 aaPredicted RBP14.07□□□□□ -0.16
SNCA-203ENST00000394986 C11orf52Q96A22 123 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 SDF2L1Q9HCN8 221 aa14.07□□□□□ -0.16
SNCA-203ENST00000394986 LYSTQ99698 3801 aa14.06□□□□□ -0.16
SNCA-203ENST00000394986 IGHV3-16A0A0C4DH30 117 aa14.06□□□□□ -0.16
SNCA-203ENST00000394986 LCE6AA0A183 80 aa14.06□□□□□ -0.16
SNCA-203ENST00000394986 SPINK4O60575 86 aa14.06□□□□□ -0.16
SNCA-203ENST00000394986 APLNQ9ULZ1 77 aa14.06□□□□□ -0.16
SNCA-203ENST00000394986 SACSQ9NZJ4 4579 aa14.05□□□□□ -0.16
SNCA-203ENST00000394986 ATP5G1P05496 136 aa14.05□□□□□ -0.16
SNCA-203ENST00000394986 RPL35P42766 123 aaKnown RBP14.05□□□□□ -0.16
SNCA-203ENST00000394986 LYPD6BQ8NI32 183 aa14.05□□□□□ -0.16
SNCA-203ENST00000394986 PCNPQ8WW12 178 aaKnown RBP14.05□□□□□ -0.16
SNCA-203ENST00000394986 KCNS1Q96KK3 526 aa14.05□□□□□ -0.16
SNCA-203ENST00000394986 VAX2Q9UIW0 290 aa14.05□□□□□ -0.16
SNCA-203ENST00000394986 F5H768 121 aa14.04□□□□□ -0.16
SNCA-203ENST00000394986 SH2D1AO60880 128 aa14.04□□□□□ -0.16
SNCA-203ENST00000394986 COX8CQ7Z4L0 72 aa14.04□□□□□ -0.16
SNCA-203ENST00000394986 TXNDC17Q9BRA2 123 aa14.04□□□□□ -0.16
SNCA-203ENST00000394986 DNAH1Q9P2D7 4330 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 TRGV2A0A075B6R0 118 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 IGKV3D-20A0A0C4DH25 116 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 FABP5P3A8MUU1 101 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 S100A9P06702 114 aaKnown RBP14.03□□□□□ -0.16
SNCA-203ENST00000394986 TMEM88Q6PEY1 159 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 TEX261Q6UWH6 196 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 BAGE2Q86Y30 109 aa14.03□□□□□ -0.16
SNCA-203ENST00000394986 PDE6DO43924 150 aa14.02□□□□□ -0.16
SNCA-203ENST00000394986 FAM162BQ5T6X4 162 aa14.02□□□□□ -0.16
SNCA-203ENST00000394986 LINC00476Q8WZB0 136 aa14.02□□□□□ -0.16
SNCA-203ENST00000394986 M0R036 132 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 ORM1P02763 201 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 HOXA5P20719 270 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 NDUFAF3Q9BU61 184 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 MLST8Q9BVC4 326 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 MED9Q9NWA0 146 aa14.01□□□□□ -0.17
SNCA-203ENST00000394986 RAB19A4D1S5 217 aa14□□□□□ -0.17
SNCA-203ENST00000394986 LY6G6CO95867 125 aa14□□□□□ -0.17
SNCA-203ENST00000394986 ZNF674Q2M3X9 581 aa14□□□□□ -0.17
SNCA-203ENST00000394986 CENPWQ5EE01 88 aa14□□□□□ -0.17
SNCA-203ENST00000394986 SPXQ9BT56 116 aa14□□□□□ -0.17
SNCA-203ENST00000394986 RBFOX3A6NFN3 312 aa13.99□□□□□ -0.17
SNCA-203ENST00000394986 B4DEV8 164 aa13.99□□□□□ -0.17
SNCA-203ENST00000394986 IGHV3-53P01767 116 aa13.99□□□□□ -0.17
SNCA-203ENST00000394986 TAGLN2P37802 199 aaKnown RBP13.99□□□□□ -0.17
SNCA-203ENST00000394986 LGALS9BQ3B8N2 356 aa13.99□□□□□ -0.17
SNCA-203ENST00000394986 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 TCTAP57738 103 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 OR5I1Q13606 314 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 TOR2AQ5JU69 321 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 PRR27Q6MZM9 219 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 RYR3Q15413 4870 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 KRBOX1C9JBD0 128 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 IGLV2-8P01709 118 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 RNASE3P12724 160 aaKnown RBP13.98□□□□□ -0.17
SNCA-203ENST00000394986 ZNF506Q5JVG8 444 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 FAM210BQ96KR6 192 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 C18orf15Q96N68 181 aa13.98□□□□□ -0.17
SNCA-203ENST00000394986 TRBV20OR9-2A0A075B6H5 130 aa13.97□□□□□ -0.17
SNCA-203ENST00000394986 GRIFINA4D1Z8 144 aa13.97□□□□□ -0.17
SNCA-203ENST00000394986 PGPEP1LA6NFU8 196 aa13.97□□□□□ -0.17
SNCA-203ENST00000394986 M0R2P5 195 aa13.97□□□□□ -0.17
SNCA-203ENST00000394986 C9orf85Q96MD7 179 aa13.97□□□□□ -0.17
SNCA-203ENST00000394986 RYR2Q92736 4967 aa13.96□□□□□ -0.17
SNCA-203ENST00000394986 A0A0J9YY99 117 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 C9JCJ5 164 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 ASIPP42127 132 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 GNG4P50150 75 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 LINC01559Q495D7 138 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 ZNF575Q86XF7 245 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 RASL10AQ92737 203 aa13.96□□□□□ -0.18
SNCA-203ENST00000394986 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
SNCA-203ENST00000394986 H3BVH4 76 aa13.95□□□□□ -0.18
SNCA-203ENST00000394986 SFTA3P0C7M3 94 aa13.95□□□□□ -0.18
SNCA-203ENST00000394986 MGST1P10620 155 aaKnown RBP13.95□□□□□ -0.18
SNCA-203ENST00000394986 S100A4P26447 101 aaKnown RBP13.95□□□□□ -0.18
SNCA-203ENST00000394986 RPL19P84098 196 aaKnown RBP13.95□□□□□ -0.18
SNCA-203ENST00000394986 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
SNCA-203ENST00000394986 EIF5A2Q9GZV4 153 aaKnown RBP13.95□□□□□ -0.18
SNCA-203ENST00000394986 LGALS9CQ6DKI2 356 aa13.94□□□□□ -0.18
SNCA-203ENST00000394986 POM121L12Q8N7R1 296 aa13.94□□□□□ -0.18
SNCA-203ENST00000394986 ZNF479Q96JC4 524 aa13.94□□□□□ -0.18
SNCA-203ENST00000394986 NUDT3O95989 172 aa13.93□□□□□ -0.18
SNCA-203ENST00000394986 CEBPGP53567 150 aa13.93□□□□□ -0.18
SNCA-203ENST00000394986 ZNF876PQ49A33 203 aa13.93□□□□□ -0.18
SNCA-203ENST00000394986 VPS13DQ5THJ4 4388 aa13.93□□□□□ -0.18
SNCA-203ENST00000394986 PARLQ9H300 379 aa13.92□□□□□ -0.18
SNCA-203ENST00000394986 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
SNCA-203ENST00000394986 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms