RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ASIPP42127 132 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 ZNF56Q15929 161 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 ANXA2RQ3ZCQ2 193 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 ZNF124Q15973 351 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
SMARCD1-202ENST00000394963 C7orf71A4D174 169 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 C20orf173Q96LM9 149 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 C19orf71A6NCJ1 209 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 EMP1P54849 157 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 MBD6Q96DN6 1003 aa12.15□□□□□ -0.46
SMARCD1-202ENST00000394963 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 CBY3A6NI87 242 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 NUDT3O95989 172 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 NPYP01303 97 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 PRM2P04554 102 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 MEGF9Q9H1U4 602 aa12.15□□□□□ -0.47
SMARCD1-202ENST00000394963 LEPP41159 167 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 CACNG7P62955 275 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 RPS20P60866 119 aaKnown RBP12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 Q0VG73 95 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 HSPB8Q9UJY1 196 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 MAST4O15021 2626 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 APRG1Q8IVJ8 170 aa12.14□□□□□ -0.47
SMARCD1-202ENST00000394963 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 M0R143 59 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 SMPXQ9UHP9 88 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 GAS8-AS1O95177 125 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 LOXL1Q08397 574 aaPredicted RBP12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 NIPBLQ6KC79 2804 aaeCLIP12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
SMARCD1-202ENST00000394963 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
SMARCD1-202ENST00000394963 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
SMARCD1-202ENST00000394963 TMEM190Q8WZ59 177 aa12.12□□□□□ -0.47
SMARCD1-202ENST00000394963 ZNF48Q96MX3 618 aaPredicted RBP12.12□□□□□ -0.47
SMARCD1-202ENST00000394963 MS4A6AQ9H2W1 248 aa12.12□□□□□ -0.47
SMARCD1-202ENST00000394963 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
SMARCD1-202ENST00000394963 LINC00310P59036 64 aa12.11□□□□□ -0.47
SMARCD1-202ENST00000394963 STPG4Q8N801 248 aa12.11□□□□□ -0.47
SMARCD1-202ENST00000394963 JPT2Q9H910 190 aa12.11□□□□□ -0.47
SMARCD1-202ENST00000394963 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
SMARCD1-202ENST00000394963 FAM104BQ5XKR9 115 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 EREGO14944 169 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 Q6AWC8 147 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 FBLL1A6NHQ2 334 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 MRPS12O15235 138 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 SAP30O75446 220 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 FOXC2Q99958 501 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 SIGLEC8Q9NYZ4 499 aa12.1□□□□□ -0.47
SMARCD1-202ENST00000394963 OVOL1O14753 267 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 LINC01587Q99440 93 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 C1orf194Q5T5A4 169 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
SMARCD1-202ENST00000394963 OR1N2Q8NGR9 330 aa12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 RPL35AP18077 110 aaKnown RBP12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 CT83Q5H943 113 aa12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 PRR9Q5T870 116 aa12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 TNFRSF6BO95407 300 aa12.08□□□□□ -0.48
SMARCD1-202ENST00000394963 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 IGHV3-53P01767 116 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 ZNF418Q8TF45 676 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 GFRA4Q9GZZ7 299 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 GOLT1BQ9Y3E0 138 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 AP1S3Q96PC3 154 aa12.07□□□□□ -0.48
SMARCD1-202ENST00000394963 J3QLI3 93 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 PF4P02776 101 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 RASL11AQ6T310 242 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 TMEM158Q8WZ71 300 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 TCF21O43680 179 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 Q6ZVH6 145 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
SMARCD1-202ENST00000394963 IFI27L1Q96BM0 104 aa12.05□□□□□ -0.48
SMARCD1-202ENST00000394963 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
SMARCD1-202ENST00000394963 IGHG4P01861 327 aa12.05□□□□□ -0.48
SMARCD1-202ENST00000394963 A0A1B0GXF2 115 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 HBDP02042 147 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 IGLL1P15814 213 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 VAMP3Q15836 100 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 NAA38Q9BRA0 125 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 PLA2G2AP14555 144 aa12.04□□□□□ -0.48
SMARCD1-202ENST00000394963 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms