RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 IGHV1-69P01742 117 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 ZNF688P0C7X2 276 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 KLF17Q5JT82 389 aaPredicted RBP14.77□□□□□ -0.04
CCDC50-202ENST00000392456 Q6Q795 121 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 CR1P17927 2039 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 OOSP1A8MZH6 123 aa14.77□□□□□ -0.05
CCDC50-202ENST00000392456 K7EMI3 77 aa14.77□□□□□ -0.05
CCDC50-202ENST00000392456 Q8N6K4 173 aa14.77□□□□□ -0.05
CCDC50-202ENST00000392456 RASL10AQ92737 203 aa14.77□□□□□ -0.05
CCDC50-202ENST00000392456 Q96MF0 132 aa14.77□□□□□ -0.05
CCDC50-202ENST00000392456 GGTLC3B5MD39 225 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 ACTL6BO94805 426 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 NPBQ8NG41 125 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 NCBP2LA6PVI3 153 aaKnown RBP14.76□□□□□ -0.05
CCDC50-202ENST00000392456 NDUFA3O95167 84 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 LTAP01374 205 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 RPL27AP46776 148 aaKnown RBP14.76□□□□□ -0.05
CCDC50-202ENST00000392456 EBI3Q14213 229 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 LRRC75A-AS1Q8N1F1 130 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 TMEM167BQ9NRX6 74 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 AP5S1Q9NUS5 200 aa14.76□□□□□ -0.05
CCDC50-202ENST00000392456 SONP18583 2426 aaKnown RBP14.76□□□□□ -0.05
CCDC50-202ENST00000392456 TEX22C9J3V5 150 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 IGHV3-48P01763 117 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 LINC01356Q8N9X3 169 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 OR8A1Q8NGG7 326 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 MDFICQ9P1T7 246 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 TMEM213A2RRL7 107 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 EVI2AP22794 236 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 C2orf83Q53S99 150 aa14.75□□□□□ -0.05
CCDC50-202ENST00000392456 CACNG7P62955 275 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 ERHP84090 104 aaKnown RBP14.74□□□□□ -0.05
CCDC50-202ENST00000392456 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
CCDC50-202ENST00000392456 TEN1Q86WV5 123 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 SRSF12Q8WXF0 261 aaKnown RBP14.74□□□□□ -0.05
CCDC50-202ENST00000392456 TRAV4A0A0B4J268 109 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 CSN3P07498 182 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 WFDC11Q8NEX6 87 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 PIFOQ8TCI5 191 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 LINC00479Q96M42 142 aa14.74□□□□□ -0.05
CCDC50-202ENST00000392456 INS-IGF2F8WCM5 200 aa14.73□□□□□ -0.05
CCDC50-202ENST00000392456 APOHP02749 345 aaPredicted RBP14.73□□□□□ -0.05
CCDC50-202ENST00000392456 LINC01587Q99440 93 aa14.73□□□□□ -0.05
CCDC50-202ENST00000392456 IGHV4-31P0DP07 118 aa14.73□□□□□ -0.05
CCDC50-202ENST00000392456 NDPQ00604 133 aa14.73□□□□□ -0.05
CCDC50-202ENST00000392456 CIARTQ8N365 385 aaPredicted RBP14.73□□□□□ -0.05
CCDC50-202ENST00000392456 MRPL32Q9BYC8 188 aaKnown RBP14.73□□□□□ -0.05
CCDC50-202ENST00000392456 MIR17HGQ75NE6 70 aa14.72□□□□□ -0.05
CCDC50-202ENST00000392456 IGKV1OR2-108A0A075B7D4 117 aa14.72□□□□□ -0.05
CCDC50-202ENST00000392456 A0A096LNJ9 63 aa14.72□□□□□ -0.05
CCDC50-202ENST00000392456 FAM106CPP0CH98 169 aa14.72□□□□□ -0.05
CCDC50-202ENST00000392456 SNCGO76070 127 aa14.71□□□□□ -0.05
CCDC50-202ENST00000392456 LINC00694P0DN24 101 aa14.71□□□□□ -0.05
CCDC50-202ENST00000392456 TMEM219Q86XT9 240 aa14.71□□□□□ -0.05
CCDC50-202ENST00000392456 Q8N9W7 124 aa14.71□□□□□ -0.05
CCDC50-202ENST00000392456 MRPL36Q9P0J6 103 aaKnown RBP14.71□□□□□ -0.05
CCDC50-202ENST00000392456 TRBV25-1A0A075B6N4 114 aa14.71□□□□□ -0.05
CCDC50-202ENST00000392456 RPL7P18124 248 aaKnown RBP14.71□□□□□ -0.05
CCDC50-202ENST00000392456 MYO9AB2RTY4 2548 aa14.71□□□□□ -0.06
CCDC50-202ENST00000392456 DLX4Q92988 240 aaPredicted RBP14.7□□□□□ -0.06
CCDC50-202ENST00000392456 IGKV2D-26A0A0A0MRZ7 120 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 IGHV3-21A0A0B4J1V1 117 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 LOC107984640A0A0U1RRK4 108 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 LINC01548A6NM66 108 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 PRR20EP86478 221 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 PRR20CP86479 221 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 PRR20DP86480 221 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 PRR20BP86481 221 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 PRR20AP86496 221 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 ZNF503Q96F45 646 aa14.7□□□□□ -0.06
CCDC50-202ENST00000392456 CRLF1O75462 422 aa14.69□□□□□ -0.06
CCDC50-202ENST00000392456 RASL11BQ9BPW5 248 aa14.69□□□□□ -0.06
CCDC50-202ENST00000392456 TTTY13Q9BZ97 58 aa14.69□□□□□ -0.06
CCDC50-202ENST00000392456 MFAP4P55083 255 aa14.69□□□□□ -0.06
CCDC50-202ENST00000392456 CD69Q07108 199 aa14.69□□□□□ -0.06
CCDC50-202ENST00000392456 FAM19A5Q7Z5A7 132 aaPredicted RBP14.68□□□□□ -0.06
CCDC50-202ENST00000392456 TAL2Q16559 108 aa14.68□□□□□ -0.06
CCDC50-202ENST00000392456 C3orf56Q8N813 242 aa14.68□□□□□ -0.06
CCDC50-202ENST00000392456 ZNF414Q96IQ9 312 aa14.68□□□□□ -0.06
CCDC50-202ENST00000392456 IGHV7-81A0A0B4J1V7 117 aa14.67□□□□□ -0.06
CCDC50-202ENST00000392456 EGR2P11161 476 aaPredicted RBP14.67□□□□□ -0.06
CCDC50-202ENST00000392456 ASIPP42127 132 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 FAM106AQ4KMX7 169 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 PSMG4Q5JS54 123 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 KLF12Q9Y4X4 402 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 LY6EQ16553 131 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 PVRIGQ6DKI7 326 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 MORN3Q6PF18 240 aaPredicted RBP14.66□□□□□ -0.06
CCDC50-202ENST00000392456 PGLYRP4Q96LB8 373 aa14.66□□□□□ -0.06
CCDC50-202ENST00000392456 SUB1P53999 127 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC50-202ENST00000392456 OR10J6PQ8NGY7 276 aa14.65□□□□□ -0.06
CCDC50-202ENST00000392456 NPIPB3Q92617 1050 aa14.65□□□□□ -0.06
CCDC50-202ENST00000392456 H3BUX3 64 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 Q6ZQT7 251 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 RBPMS2Q6ZRY4 209 aaKnown RBP14.64□□□□□ -0.07
CCDC50-202ENST00000392456 SBSPONQ8IVN8 264 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 PRSS3P2Q8NHM4 247 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 TMEM158Q8WZ71 300 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 CUBNO60494 3623 aa14.64□□□□□ -0.07
CCDC50-202ENST00000392456 RPP21Q9H633 154 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms