RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 NUDT3O95989 172 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 LINC00336Q6ZUF6 198 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 UBE2DNLQ8IWF7 75 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 TMEM183AQ8IXX5 376 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 VSIG2Q96IQ7 327 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 C8orf49Q96NF6 230 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
RER1-202ENST00000378512 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 TMUB2Q71RG4 321 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 IQCF2Q8IXL9 164 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 STOML3Q8TAV4 291 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
RER1-202ENST00000378512 MRPL16Q9NX20 251 aaKnown RBP11.81□□□□□ -0.52
RER1-202ENST00000378512 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
RER1-202ENST00000378512 GNRH2O43555 120 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 TYMSP04818 313 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 UBE2G2P60604 165 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 SAPCD1Q5SSQ6 148 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 DPPA3Q6W0C5 159 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 ZNRF2Q8NHG8 242 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 KCNS1Q96KK3 526 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 LINC00479Q96M42 142 aa11.8□□□□□ -0.52
RER1-202ENST00000378512 PEX7O00628 323 aa11.79□□□□□ -0.52
RER1-202ENST00000378512 GCGP01275 180 aa11.79□□□□□ -0.52
RER1-202ENST00000378512 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
RER1-202ENST00000378512 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
RER1-202ENST00000378512 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
RER1-202ENST00000378512 TCEAL7Q9BRU2 100 aa11.79□□□□□ -0.52
RER1-202ENST00000378512 LINC00588Q9Y4M8 146 aa11.79□□□□□ -0.52
RER1-202ENST00000378512 A0A0J9YY99 117 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 CCL18P55774 89 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 FHL2Q14192 279 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 LGALSLQ3ZCW2 172 aaPredicted RBP11.78□□□□□ -0.52
RER1-202ENST00000378512 SMUG1Q53HV7 270 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 SDF2L1Q9HCN8 221 aa11.78□□□□□ -0.52
RER1-202ENST00000378512 A0A096LPF7 62 aa11.77□□□□□ -0.52
RER1-202ENST00000378512 TRAV34A0A0B4J273 112 aa11.77□□□□□ -0.52
RER1-202ENST00000378512 IFNA7P01567 189 aa11.77□□□□□ -0.52
RER1-202ENST00000378512 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.52
RER1-202ENST00000378512 NAGKQ9UJ70 344 aa11.77□□□□□ -0.52
RER1-202ENST00000378512 TRBV6-1A0A0K0K1D8 114 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 M0R2P5 195 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 C1QBP02746 253 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 SLAQ13239 276 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 ZFP69Q49AA0 526 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 Q86TA4 180 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 PRO0255Q9UI72 69 aa11.77□□□□□ -0.53
RER1-202ENST00000378512 PFDN1O60925 122 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 PPT1P50897 306 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 CRYBA4P53673 196 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 ESRGQ1W209 222 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 FAM213BQ8TBF2 198 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
RER1-202ENST00000378512 PTH2Q96A98 100 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 ZNF479Q96JC4 524 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 ZFP30Q9Y2G7 519 aa11.75□□□□□ -0.53
RER1-202ENST00000378512 TRAV4A0A0B4J268 109 aa11.74□□□□□ -0.53
RER1-202ENST00000378512 IGHV3-53P01767 116 aa11.74□□□□□ -0.53
RER1-202ENST00000378512 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
RER1-202ENST00000378512 TRAV1-1A0A0B4J248 108 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 PAX4O43316 350 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 PAGE4O60829 102 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 H2AFB1P0C5Y9 115 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 CRIP1P50238 77 aa11.73□□□□□ -0.53
RER1-202ENST00000378512 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
RER1-202ENST00000378512 RYR1P21817 5038 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 NBDYA0A0U1RRE5 68 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 FABP5P3A8MUU1 101 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 LTAP01374 205 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 SFTA3P0C7M3 94 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 RAB5CP51148 216 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 CST9LP1Q5W188 147 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 ZNF575Q86XF7 245 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 ZC2HC1AQ96GY0 325 aa11.72□□□□□ -0.53
RER1-202ENST00000378512 DNLZQ5SXM8 178 aa11.71□□□□□ -0.53
RER1-202ENST00000378512 Q9H8V8 135 aa11.71□□□□□ -0.53
RER1-202ENST00000378512 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
RER1-202ENST00000378512 SULT1A2P50226 295 aa11.7□□□□□ -0.54
RER1-202ENST00000378512 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
RER1-202ENST00000378512 PIK3CD-AS1Q5SR53 167 aa11.7□□□□□ -0.54
RER1-202ENST00000378512 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
RER1-202ENST00000378512 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 CIDEAO60543 219 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 UBE2G1P62253 170 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
RER1-202ENST00000378512 ZNF876PQ49A33 203 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 SLC51BQ86UW2 128 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 OR4C5Q8NGB2 326 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
RER1-202ENST00000378512 K7EQD1 137 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms