RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CHKB-CPT1BH3BT56 60 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 ZNF747Q9BV97 191 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 ARHGEF17Q96PE2 2063 aaPredicted RBP9.05□□□□□ -0.96
VCL-202ENST00000372755 NDUFB1O75438 58 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 ATP5G1P05496 136 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 CCL18P55774 89 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 C17orf77Q96MU5 243 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 H0YGX0 51 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
VCL-202ENST00000372755 K7EN84 100 aa9.04□□□□□ -0.96
VCL-202ENST00000372755 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
VCL-202ENST00000372755 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
VCL-202ENST00000372755 MRPL36Q9P0J6 103 aaKnown RBP9.04□□□□□ -0.96
VCL-202ENST00000372755 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
VCL-202ENST00000372755 DAZ4Q86SG3 579 aaKnown RBP9.04□□□□□ -0.96
VCL-202ENST00000372755 DAZ3Q9NR90 486 aaKnown RBP9.04□□□□□ -0.96
VCL-202ENST00000372755 GYPEP15421 78 aa9.04□□□□□ -0.96
VCL-202ENST00000372755 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
VCL-202ENST00000372755 CENPVL3A0A0U1RRI6 287 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 COX7A2LO14548 114 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 GP9P14770 177 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 RTTNQ86VV8 2226 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 INTS1Q8N201 2190 aaKnown RBP9.03□□□□□ -0.96
VCL-202ENST00000372755 IGHG2P01859 326 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 IGLV3-1P01715 115 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 IL15RAQ13261 267 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 NPBQ8NG41 125 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 NPSP0C0P6 89 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 AMTNQ6UX39 209 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 PRSS33Q8NF86 280 aa9.03□□□□□ -0.96
VCL-202ENST00000372755 XIRP1Q702N8 1843 aaKnown RBP9.02□□□□□ -0.96
VCL-202ENST00000372755 IGLV2-23P01705 113 aa9.02□□□□□ -0.96
VCL-202ENST00000372755 RSPO1Q2MKA7 263 aaPredicted RBP9.02□□□□□ -0.97
VCL-202ENST00000372755 DEFB113Q30KQ7 82 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 Q6ZVH6 145 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 CEP290O15078 2479 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 MP68P56378 58 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 SDK2Q58EX2 2172 aa9.02□□□□□ -0.97
VCL-202ENST00000372755 ASPHD1Q5U4P2 390 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 SLURP1P55000 103 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 DEFB136Q30KP8 78 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 SND1-IT1Q9HBX3 110 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 TRIOBPQ9H2D6 2365 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 COX7B2Q8TF08 81 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 OPRPNQ99935 248 aaPredicted RBP9.01□□□□□ -0.97
VCL-202ENST00000372755 MPDZO75970 2070 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 C5orf47Q569G3 176 aa9.01□□□□□ -0.97
VCL-202ENST00000372755 ARTNQ5T4W7 220 aa9□□□□□ -0.97
VCL-202ENST00000372755 HIST2H2BCQ6DN03 193 aa9□□□□□ -0.97
VCL-202ENST00000372755 CACNA1DQ01668 2161 aa9□□□□□ -0.97
VCL-202ENST00000372755 SCN5AQ14524 2016 aa9□□□□□ -0.97
VCL-202ENST00000372755 IGHV3-30P01768 117 aa9□□□□□ -0.97
VCL-202ENST00000372755 IGHV3-33P01772 117 aa9□□□□□ -0.97
VCL-202ENST00000372755 IGHV3-30-3P0DP02 117 aa9□□□□□ -0.97
VCL-202ENST00000372755 IGHV3-30-5P0DP03 117 aa9□□□□□ -0.97
VCL-202ENST00000372755 VSIG2Q96IQ7 327 aa9□□□□□ -0.97
VCL-202ENST00000372755 RS1O15537 224 aa9□□□□□ -0.97
VCL-202ENST00000372755 WISP1O95388 367 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 CLPSL1A2RUU4 121 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 PIP4P1Q86T03 277 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 AJUBAQ96IF1 538 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 ZDBF2Q9HCK1 2354 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 I3L2K1 104 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 NDUFA1O15239 70 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 Q8NFD4 153 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 SLX1AQ9BQ83 275 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 IGHV7-81A0A0B4J1V7 117 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
VCL-202ENST00000372755 A0A0B4J2C4 111 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 UBE2AP49459 152 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
VCL-202ENST00000372755 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 C11orf53Q8IXP5 236 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 A0A1B0GX51 115 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
VCL-202ENST00000372755 NREPQ16612 68 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 IGFBPL1Q8WX77 278 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 IGLV11-55A0A075B6I3 123 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 WFDC9Q8NEX5 89 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 TIMM17AQ99595 171 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
VCL-202ENST00000372755 CXCL5P42830 114 aa8.98□□□□□ -0.97
VCL-202ENST00000372755 EP300Q09472 2414 aaPredicted RBP8.98□□□□□ -0.97
VCL-202ENST00000372755 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 IGLL5B9A064 214 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 CCL25O15444 150 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 CACNA1EQ15878 2313 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 IGHV4-38-2P0DP08 117 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
VCL-202ENST00000372755 A0A0J9YXV3 536 aa8.96□□□□□ -0.97
VCL-202ENST00000372755 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1424.5 ms