RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
PTPRK-204ENST00000368210 SP5Q6BEB4 398 aaPredicted RBP10.51□□□□□ -0.73
PTPRK-204ENST00000368210 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 TMEM14CQ9P0S9 112 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 NDUFS7O75251 213 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
PTPRK-204ENST00000368210 FAM104BQ5XKR9 115 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 CD28P10747 220 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
PTPRK-204ENST00000368210 H3BRN7 92 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 WISP2O76076 250 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 HIGD1BQ9P298 99 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 V9GYY9 64 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 NSUN5P1Q3KNT7 163 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 EML6Q6ZMW3 1958 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 TRGV4A0A0C4DH28 118 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 TMEM213A2RRL7 107 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 SOCS3O14543 225 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 HTN3P15516 51 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 IL17RELQ6ZVW7 336 aa10.49□□□□□ -0.73
PTPRK-204ENST00000368210 TRBV25-1A0A075B6N4 114 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
PTPRK-204ENST00000368210 ZC2HC1AQ96GY0 325 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 IGKV3D-20A0A0C4DH25 116 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 CRPP02741 224 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 NPC2P61916 151 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 PRO3102Q9H379 93 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 ATP5G1P05496 136 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 PRR25Q96S07 402 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 C20orf78Q9BR46 151 aa10.48□□□□□ -0.73
PTPRK-204ENST00000368210 VCYO14598 125 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 MORN5Q5VZ52 161 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 ATRXP46100 2492 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-204ENST00000368210 C3orf56Q8N813 242 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 ZNF491Q8N8L2 437 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 PTH2Q96A98 100 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
PTPRK-204ENST00000368210 IGHV3-73A0A0B4J1V6 119 aa10.46□□□□□ -0.73
PTPRK-204ENST00000368210 VWC2LB2RUY7 222 aa10.46□□□□□ -0.73
PTPRK-204ENST00000368210 MT-ATP8P03928 68 aa10.46□□□□□ -0.73
PTPRK-204ENST00000368210 FXYD2P54710 66 aa10.46□□□□□ -0.73
PTPRK-204ENST00000368210 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.73
PTPRK-204ENST00000368210 F8VRH5 84 aa10.46□□□□□ -0.73
PTPRK-204ENST00000368210 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.74
PTPRK-204ENST00000368210 PRSS46E5RG02 174 aa10.46□□□□□ -0.74
PTPRK-204ENST00000368210 Q8N8P6 123 aa10.46□□□□□ -0.74
PTPRK-204ENST00000368210 KNCNA6PVL3 124 aa10.46□□□□□ -0.74
PTPRK-204ENST00000368210 K7EN84 100 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 ALPK3Q96L96 1907 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 A0A087WWL8 130 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 NDUFA4O00483 81 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 CFC1P0CG37 223 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 DEFB131AP59861 70 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 MSMPQ1L6U9 139 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 SPATA12Q7Z6I5 190 aa10.45□□□□□ -0.74
PTPRK-204ENST00000368210 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-204ENST00000368210 MED12LQ86YW9 2145 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 FAM120AOSQ5T036 256 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 TNCP24821 2201 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 HLA-DRB4P13762 266 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 HLA-DRB4X5D2U9 266 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 PTPN13Q12923 2485 aa10.44□□□□□ -0.74
PTPRK-204ENST00000368210 NCOR2Q9Y618 2525 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 IGLV2-14P01704 120 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 CHCHD5Q9BSY4 110 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 PIEZO2Q9H5I5 2752 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 ASPHD1Q5U4P2 390 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 YPEL4Q96NS1 127 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 UQCRQO14949 82 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 CTRLP40313 264 aa10.43□□□□□ -0.74
PTPRK-204ENST00000368210 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
PTPRK-204ENST00000368210 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
PTPRK-204ENST00000368210 INSP01308 110 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 A0A1B0GX51 115 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-204ENST00000368210 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
PTPRK-204ENST00000368210 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 IGF2RP11717 2491 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 SPATA25Q9BR10 227 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 DYSFO75923 2080 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 C17orf77Q96MU5 243 aa10.42□□□□□ -0.74
PTPRK-204ENST00000368210 TNRC6AQ8NDV7 1962 aaKnown RBP10.41□□□□□ -0.74
PTPRK-204ENST00000368210 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms