RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 HRCT1Q6UXD1 115 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 C10orf105Q8TEF2 133 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGHV1-2P23083 117 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC00694P0DN24 101 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC00205P59089 165 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 BRD3OSQ6XYD6 125 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 ZNF493Q6ZR52 646 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 TP53TG1Q9Y2A0 90 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 JMJD1CQ15652 2540 aa8.93□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 C9orf106Q8NAJ2 232 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 DKK1O94907 266 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 NPYP01303 97 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 C8orf31Q8N9H6 132 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 VMO1Q7Z5L0 202 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 FAM110DQ8TAY7 271 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 IGHG2P01859 326 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 Q71RC1 249 aaPredicted RBP8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 DKK4Q9UBT3 224 aa8.92□□□□□ -0.98
CDC42BPA-205ENST00000366769 TRBV25-1A0A075B6N4 114 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 LINC00473A8K010 186 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 C3orf22Q8N5N4 141 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 LMO1P25800 156 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 Q6ZR03 302 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 TIMM17AQ99595 171 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 ZNF492Q9P255 531 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 LY6G5BQ8NDX9 201 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 XCL2Q9UBD3 114 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 CENPVL3A0A0U1RRI6 287 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 C14orf132Q9NPU4 83 aa8.91□□□□□ -0.98
CDC42BPA-205ENST00000366769 H3BUX3 64 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 RNF114Q9Y508 228 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 ETV2O00321 342 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 Q8N8P6 123 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 FAM110AQ9BQ89 295 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 SPANXDQ9BXN6 97 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 A0A096LPF7 62 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 C20orf204Q6ZNR8 217 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 PRDM6Q9NQX0 595 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 RNASE2P10153 161 aaKnown RBP8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 SAP25Q8TEE9 199 aa8.9□□□□□ -0.98
CDC42BPA-205ENST00000366769 EFNA4P52798 201 aa8.9□□□□□ -0.99
CDC42BPA-205ENST00000366769 SPATA25Q9BR10 227 aa8.9□□□□□ -0.99
CDC42BPA-205ENST00000366769 Q9HAA7 133 aa8.9□□□□□ -0.99
CDC42BPA-205ENST00000366769 ICOSQ9Y6W8 199 aa8.89□□□□□ -0.99
CDC42BPA-205ENST00000366769 C1orf195Q5TG92 126 aa8.89□□□□□ -0.99
CDC42BPA-205ENST00000366769 VPREB3Q9UKI3 123 aa8.89□□□□□ -0.99
CDC42BPA-205ENST00000366769 EIF4EBP2Q13542 120 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-205ENST00000366769 ZNF747Q9BV97 191 aa8.89□□□□□ -0.99
CDC42BPA-205ENST00000366769 IGHV3-38A0A0C4DH36 116 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 TCL1BO95988 128 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 CT83Q5H943 113 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 J3QQQ9 107 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 BAALC-AS2P0C853 105 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 PAX9P55771 341 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 TRBV7-1A0A0A6YYK4 115 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 LINC00271P0C7V0 271 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 ODF1Q14990 250 aa8.88□□□□□ -0.99
CDC42BPA-205ENST00000366769 ANGP03950 147 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 DEFB131AP59861 70 aa8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 KLK9Q9UKQ9 250 aa8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 NAV2Q8IVL1 2488 aa8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 MBD3L4A6NDZ8 208 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 MBD3L3A6NE82 208 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 MBD3L5A6NJ08 208 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 MBD3L2Q8NHZ7 208 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 TRGV9Q99603 122 aa8.87□□□□□ -0.99
CDC42BPA-205ENST00000366769 CRYGCP07315 174 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 SPINK13Q1W4C9 94 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 ZFP36L1Q07352 338 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 PSPNO60542 156 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 CFC1BP0CG36 223 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 CFC1P0CG37 223 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 SHISA2Q6UWI4 295 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 NDUFA12Q9UI09 145 aa8.86□□□□□ -0.99
CDC42BPA-205ENST00000366769 RBAKDNA6NC62 111 aa8.85□□□□□ -0.99
CDC42BPA-205ENST00000366769 RMI2Q96E14 147 aa8.85□□□□□ -0.99
CDC42BPA-205ENST00000366769 RAI1Q7Z5J4 1906 aaPredicted RBP8.85□□□□□ -0.99
CDC42BPA-205ENST00000366769 OOSP1A8MZH6 123 aa8.85□□□□□ -0.99
CDC42BPA-205ENST00000366769 RPL18AQ02543 176 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-205ENST00000366769 POLQO75417 2590 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms