RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 CSMD1Q96PZ7 3565 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 TMSB15BA0A087X1C1 80 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 PGPA6NDG6 321 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 IGHG4P01861 327 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 IL4P05112 153 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 SLC25A16P16260 332 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 SUB1P53999 127 aaKnown RBP eCLIP3.12□□□□□ -1.91
CNGA1-201ENST00000358519 RIGQ13278 110 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ALKBH6Q3KRA9 238 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ZC2HC1BQ5TFG8 222 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 SFTA2Q6UW10 78 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ZFP2Q6ZN57 461 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 PPP1R27Q86WC6 154 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 CIARTQ8N365 385 aaPredicted RBP3.12□□□□□ -1.91
CNGA1-201ENST00000358519 OR11H6Q8NGC7 330 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 RFESDQ8TAC1 157 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 FXYD5Q96DB9 178 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF714Q96N38 554 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM126AQ9H061 195 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 DYNLRB1Q9NP97 96 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 CALYQ9NYX4 217 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 U3KQE9 123 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 STAB1Q9NY15 2570 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 JMJD1CQ15652 2540 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 C15orf61A6NNL5 157 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 ENSAO43768 121 aaKnown RBP3.12□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV3-9P01782 118 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 IGKCP01834 107 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 MYOD1P15172 320 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 EFNA4P52798 201 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 HSPE1P61604 102 aaKnown RBP3.12□□□□□ -1.91
CNGA1-201ENST00000358519 BSPH1Q075Z2 132 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 C3orf56Q8N813 242 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 RASL10AQ92737 203 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 FMC1Q96HJ9 113 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 DCTN5Q9BTE1 182 aa3.12□□□□□ -1.91
CNGA1-201ENST00000358519 PRRC2CQ9Y520 2896 aaKnown RBP3.11□□□□□ -1.91
CNGA1-201ENST00000358519 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 ABCA4P78363 2273 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 ATRQ13535 2644 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TRBV7-3A0A075B6L6 115 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 IGKV1D-17A0A075B6S4 117 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 IGHV3-64DA0A0J9YX35 117 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM89A2RUT3 159 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 A4D1N5 150 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 H3BVH4 76 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 COX7A2P2O60397 106 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 PRSS1P07477 247 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 FOXG1P55316 489 aaPredicted RBP3.11□□□□□ -1.91
CNGA1-201ENST00000358519 LOXL3P58215 753 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 C10orf113Q5VZT2 155 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 PATE2Q6UY27 113 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 Q6ZQT7 251 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 CD177Q8N6Q3 437 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 GATD1Q8NB37 220 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 OR1L8Q8NGR8 309 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 SRSF12Q8WXF0 261 aaKnown RBP3.11□□□□□ -1.91
CNGA1-201ENST00000358519 RASL11BQ9BPW5 248 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TPPP3Q9BW30 176 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM14BQ9NUH8 114 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TRAV8-1A0A0A6YYK1 113 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TRAV8-2A0A0B4J237 113 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 A8MWV9 139 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 H3BUA1 57 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 PLAUP00749 431 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 LINC00694P0DN24 101 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 HLA-DRB4P13762 266 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 ASIPP42127 132 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 DLX6P56179 175 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 EBI3Q14213 229 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 VMA21Q3ZAQ7 101 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 RPL39P5Q59GN2 51 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 Q6Q795 121 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 ORMDL3Q8N138 153 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM167AQ8TBQ9 72 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM160Q9NX00 188 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 MDFICQ9P1T7 246 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 U3KQK5 164 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 HLA-DRB4X5D2U9 266 aa3.11□□□□□ -1.91
CNGA1-201ENST00000358519 TRAV40A0A0B4J280 105 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 LOC107984640A0A0U1RRK4 108 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 MYMXA0A1B0GTQ4 84 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 SMIM9A6NGZ8 99 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 E7EQL1 145 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 C19orf84I3L1E1 186 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 DPM2O94777 84 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TCRAP04437 139 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 GRPP07492 148 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 CRIP2P52943 208 aaPredicted RBP3.1□□□□□ -1.91
CNGA1-201ENST00000358519 UBE2D3P61077 147 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 UBE2D2P62837 147 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 C17orf58Q2M2W7 97 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 C2orf83Q53S99 150 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 TMEM78Q5T7P6 136 aa3.1□□□□□ -1.91
CNGA1-201ENST00000358519 ZNF493Q6ZR52 646 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms