RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 IGKV3-20P01619 116 aa10.52□□□□□ -0.72
TRIM4-203ENST00000355947 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.72
TRIM4-203ENST00000355947 CTSGP08311 255 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 Q1RN00 199 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 C16orf54Q6UWD8 224 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 DPF1Q92782 380 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 HOXB4P17483 251 aaPredicted RBP10.52□□□□□ -0.73
TRIM4-203ENST00000355947 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 C1orf122Q6ZSJ8 110 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 TMEM219Q86XT9 240 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 Q8N8P6 123 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
TRIM4-203ENST00000355947 MRPS12O15235 138 aaKnown RBP10.51□□□□□ -0.73
TRIM4-203ENST00000355947 IGLC6P0CF74 106 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 U3KQK5 164 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 F6UB75 175 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 IGHV3-11P01762 117 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 PRTN3P24158 256 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 PDE6HQ13956 83 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 Q6ZS92 163 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 PTPN13Q12923 2485 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 CEACAM4O75871 244 aa10.51□□□□□ -0.73
TRIM4-203ENST00000355947 SRSF1Q07955 248 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRIM4-203ENST00000355947 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
TRIM4-203ENST00000355947 UBTD1Q9HAC8 227 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 CUBNO60494 3623 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 E9PLD3 99 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 F8W1H4 67 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 HTN1P15515 57 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 TNFRSF14Q92956 283 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 TIMD4Q96H15 378 aa10.5□□□□□ -0.73
TRIM4-203ENST00000355947 RNASE4P34096 147 aaKnown RBP10.49□□□□□ -0.73
TRIM4-203ENST00000355947 USP9YO00507 2555 aaPredicted RBP10.49□□□□□ -0.73
TRIM4-203ENST00000355947 WNK1Q9H4A3 2382 aa10.49□□□□□ -0.73
TRIM4-203ENST00000355947 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
TRIM4-203ENST00000355947 CELSR1Q9NYQ6 3014 aa10.49□□□□□ -0.73
TRIM4-203ENST00000355947 IGLV11-55A0A075B6I3 123 aa10.49□□□□□ -0.73
TRIM4-203ENST00000355947 ZNF256Q9Y2P7 627 aaPredicted RBP10.49□□□□□ -0.73
TRIM4-203ENST00000355947 A0A087WX48 190 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 ZNF292O60281 2723 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 A0A087WWL8 130 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 B9A039 149 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 H7C1H1 209 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 C2orf66Q6UXQ4 117 aa10.48□□□□□ -0.73
TRIM4-203ENST00000355947 PHLDA1Q8WV24 401 aaPredicted RBP10.48□□□□□ -0.73
TRIM4-203ENST00000355947 TLN2Q9Y4G6 2542 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 IGHG4P01861 327 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 VMO1Q7Z5L0 202 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 KIR2DL4Q99706 377 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 F8VRH5 84 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 F8W735 103 aaPredicted RBP10.47□□□□□ -0.73
TRIM4-203ENST00000355947 ATP6V0E1O15342 81 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 METTL26Q96S19 204 aa10.47□□□□□ -0.73
TRIM4-203ENST00000355947 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 CCL21O00585 134 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 GNRH2O43555 120 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 CRYBA4P53673 196 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 NPC2P61916 151 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 PAX8Q06710 450 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 TM2D2Q9BX73 214 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 HIGD1BQ9P298 99 aa10.46□□□□□ -0.73
TRIM4-203ENST00000355947 C8orf86Q6ZUL3 223 aa10.46□□□□□ -0.74
TRIM4-203ENST00000355947 JPT2Q9H910 190 aa10.46□□□□□ -0.74
TRIM4-203ENST00000355947 SMPXQ9UHP9 88 aa10.46□□□□□ -0.74
TRIM4-203ENST00000355947 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
TRIM4-203ENST00000355947 PLNP26678 52 aa10.45□□□□□ -0.74
TRIM4-203ENST00000355947 C8orf31Q8N9H6 132 aa10.45□□□□□ -0.74
TRIM4-203ENST00000355947 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
TRIM4-203ENST00000355947 TRBV6-1A0A0K0K1D8 114 aa10.45□□□□□ -0.74
TRIM4-203ENST00000355947 LGALS1P09382 135 aaKnown RBP10.45□□□□□ -0.74
TRIM4-203ENST00000355947 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
TRIM4-203ENST00000355947 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
TRIM4-203ENST00000355947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.45□□□□□ -0.74
TRIM4-203ENST00000355947 PRR9Q5T870 116 aa10.45□□□□□ -0.74
TRIM4-203ENST00000355947 HIVEP3Q5T1R4 2406 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 ADARB2-AS1A8MUL3 147 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 PRSS2P07478 247 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 LY6EQ16553 131 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 CENPEQ02224 2701 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 TNFRSF13BO14836 293 aaPredicted RBP10.44□□□□□ -0.74
TRIM4-203ENST00000355947 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 LINC00477Q96M19 166 aa10.44□□□□□ -0.74
TRIM4-203ENST00000355947 COL27A1Q8IZC6 1860 aaPredicted RBP10.43□□□□□ -0.74
TRIM4-203ENST00000355947 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
TRIM4-203ENST00000355947 TRAV2A0A0B4J234 112 aa10.43□□□□□ -0.74
TRIM4-203ENST00000355947 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
TRIM4-203ENST00000355947 BUB3O43684 328 aa10.43□□□□□ -0.74
TRIM4-203ENST00000355947 FOXI1Q12951 378 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms