RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 SRXN1Q9BYN0 137 aa6.57□□□□□ -1.36
TDP1-201ENST00000335725 LMO7DNF2Z398 122 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 SPRY2O43597 315 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 SH2D1AO60880 128 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 XCL1P47992 114 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 ERCC8Q13216 396 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 FANCD2OSQ96PS1 177 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 XCL2Q9UBD3 114 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 RTTNQ86VV8 2226 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 MLANAQ16655 118 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 U3KQE9 123 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 IGLV3-32A0A0A0MS00 114 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 WNT9BO14905 357 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 UBE2E1P51965 193 aa6.56□□□□□ -1.36
TDP1-201ENST00000335725 ZNF784Q8NCA9 323 aaPredicted RBP6.56□□□□□ -1.36
TDP1-201ENST00000335725 IGKV3D-11A0A0A0MRZ8 115 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 PATE4P0C8F1 98 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 RPS21P63220 83 aaKnown RBP6.55□□□□□ -1.36
TDP1-201ENST00000335725 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
TDP1-201ENST00000335725 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 IGHV3-43A0A0B4J1X8 118 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 A0A1W2PQU0 124 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 PLAC8L1A1L4L8 177 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 DEFB108AA8MXU0 73 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 IGHV3-43DP0DP04 118 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 CD40P25942 277 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 CCL26Q9Y258 94 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 FAM223BA6NKX1 122 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 GHRHP01286 108 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
TDP1-201ENST00000335725 GFRALQ6UXV0 394 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
TDP1-201ENST00000335725 TRBV7-6A0A0J9YX20 115 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 IGHV4-34P06331 123 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 CFHR3Q02985 330 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 CXCL17Q6UXB2 119 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
TDP1-201ENST00000335725 DNAL4O96015 105 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 SMIM2Q9BVW6 85 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 SDHAF1A6NFY7 115 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 NDUFC1O43677 76 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 BCE1O60756 84 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 ADORA2A-AS1P86434 159 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
TDP1-201ENST00000335725 CCKP06307 115 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 DAZ2Q13117 558 aaKnown RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 DAZ3Q9NR90 486 aaKnown RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 RNF7Q9UBF6 113 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 A0A0J9YX75 114 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 H7BZZ5 65 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 GATA1P15976 413 aaPredicted RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 KLK15Q9H2R5 256 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 LRP4O75096 1905 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 TET2Q6N021 2002 aaPredicted RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 IGHV1-45A0A0A0MS14 117 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 PAX4O43316 350 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 PROP1O75360 226 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 S100A7L2Q5SY68 101 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 COX8CQ7Z4L0 72 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 C14orf178Q8N769 122 aaPredicted RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 KLF14Q8TD94 323 aaPredicted RBP6.53□□□□□ -1.36
TDP1-201ENST00000335725 MOB4Q9Y3A3 225 aa6.53□□□□□ -1.36
TDP1-201ENST00000335725 IGKV1D-37A0A075B6S9 117 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 I3L3M4 83 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 LEPROTO15243 131 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 ZNF407Q9C0G0 2248 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 SAA4P35542 130 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 CIRBPQ14011 172 aaKnown RBP6.52□□□□□ -1.37
TDP1-201ENST00000335725 RPL39P5Q59GN2 51 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 NRACQ8N912 160 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 COL4A6Q14031 1691 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 GAS8-AS1O95177 125 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 MAGEA5P43359 124 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 INTS1Q8N201 2190 aaKnown RBP6.52□□□□□ -1.37
TDP1-201ENST00000335725 RNASE6Q93091 150 aaKnown RBP6.52□□□□□ -1.37
TDP1-201ENST00000335725 C8orf49Q96NF6 230 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 CTSZQ9UBR2 303 aa6.52□□□□□ -1.37
TDP1-201ENST00000335725 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 SS18Q15532 418 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 MUC22E2RYF6 1773 aaPredicted RBP6.51□□□□□ -1.37
TDP1-201ENST00000335725 KNTC1P50748 2209 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 PSPNO60542 156 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 PCOLCEQ15113 449 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 TNRC6BQ9UPQ9 1833 aaKnown RBP6.51□□□□□ -1.37
TDP1-201ENST00000335725 DOCK7Q96N67 2140 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 IGHV3-15A0A0B4J1V0 119 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 HILS1P60008 231 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
TDP1-201ENST00000335725 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
TDP1-201ENST00000335725 EGR2P11161 476 aaPredicted RBP6.5□□□□□ -1.37
TDP1-201ENST00000335725 AMELXQ99217 191 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms