RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 ECSCRQ19T08 205 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 DCHS2Q6V1P9 2916 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 CLEC3BP05452 202 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 NFE4Q86UQ8 179 aa11.29□□□□□ -0.6
COL6A2-202ENST00000310645 SPTAN1Q13813 2472 aaKnown RBP11.28□□□□□ -0.6
COL6A2-202ENST00000310645 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
COL6A2-202ENST00000310645 SLC25A16P16260 332 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 DLX4Q92988 240 aaPredicted RBP11.28□□□□□ -0.6
COL6A2-202ENST00000310645 PLEKHB2Q96CS7 222 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 SCGB2A1O75556 95 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 RPL39LQ96EH5 51 aaKnown RBP11.28□□□□□ -0.6
COL6A2-202ENST00000310645 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
COL6A2-202ENST00000310645 C15orf32Q32M92 178 aa11.27□□□□□ -0.6
COL6A2-202ENST00000310645 IGHV7-4-1A0A0J9YVY3 117 aa11.27□□□□□ -0.61
COL6A2-202ENST00000310645 MGPP08493 103 aa11.27□□□□□ -0.61
COL6A2-202ENST00000310645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.27□□□□□ -0.61
COL6A2-202ENST00000310645 PSMG3-AS1Q96PY0 264 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-202ENST00000310645 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
COL6A2-202ENST00000310645 NPBQ8NG41 125 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 CDIP1Q9H305 208 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 IGF1P05019 195 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
COL6A2-202ENST00000310645 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
COL6A2-202ENST00000310645 BUB3O43684 328 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
COL6A2-202ENST00000310645 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 TCTEX1D4Q5JR98 221 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 IGFL3Q6UXB1 125 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 ASH1LQ9NR48 2969 aaKnown RBP11.25□□□□□ -0.61
COL6A2-202ENST00000310645 CEP295Q9C0D2 2601 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 B9A039 149 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 CD3EP07766 207 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 XGP55808 180 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 FHL3Q13643 280 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
COL6A2-202ENST00000310645 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
COL6A2-202ENST00000310645 TLN1Q9Y490 2541 aaKnown RBP11.24□□□□□ -0.61
COL6A2-202ENST00000310645 TSPAN13O95857 204 aa11.24□□□□□ -0.61
COL6A2-202ENST00000310645 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
COL6A2-202ENST00000310645 TMEM238LA0A1B0GVL6 79 aa11.24□□□□□ -0.61
COL6A2-202ENST00000310645 A6NJY4 79 aa11.24□□□□□ -0.61
COL6A2-202ENST00000310645 SCGB1C2P0DMR2 95 aa11.24□□□□□ -0.61
COL6A2-202ENST00000310645 DEFB1P60022 68 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 ZNF48Q96MX3 618 aaPredicted RBP11.23□□□□□ -0.61
COL6A2-202ENST00000310645 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 MSRB2Q9Y3D2 182 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 ARL3P36405 182 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 NEXN-AS1Q8NBZ9 246 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
COL6A2-202ENST00000310645 TRAV12-1A0A0B4J245 112 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 PRR9Q5T870 116 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 RELNP78509 3460 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 Q6ZUT4 128 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 RASL10AQ92737 203 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
COL6A2-202ENST00000310645 GATA3P23771 443 aa11.21□□□□□ -0.61
COL6A2-202ENST00000310645 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
COL6A2-202ENST00000310645 KIR2DL4Q99706 377 aa11.21□□□□□ -0.61
COL6A2-202ENST00000310645 TRAV8-2A0A0B4J237 113 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 G3V318 75 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 CARD19Q96LW7 228 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 H7C2G1 150 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 RNF183Q96D59 192 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 PHLDA3Q9Y5J5 127 aa11.21□□□□□ -0.62
COL6A2-202ENST00000310645 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-202ENST00000310645 VMO1Q7Z5L0 202 aa11.2□□□□□ -0.62
COL6A2-202ENST00000310645 ZFAND3Q9H8U3 227 aa11.2□□□□□ -0.62
COL6A2-202ENST00000310645 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
COL6A2-202ENST00000310645 TCL1BO95988 128 aa11.2□□□□□ -0.62
COL6A2-202ENST00000310645 RBAKDNA6NC62 111 aa11.19□□□□□ -0.62
COL6A2-202ENST00000310645 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
COL6A2-202ENST00000310645 PPDPFLQ8WWR9 84 aa11.19□□□□□ -0.62
COL6A2-202ENST00000310645 METTL26Q96S19 204 aa11.19□□□□□ -0.62
COL6A2-202ENST00000310645 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 GRNP28799 593 aaKnown RBP11.18□□□□□ -0.62
COL6A2-202ENST00000310645 UBE2D1P51668 147 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 Q6ZS46 218 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 FAM90A27PA6NNH2 459 aa11.18□□□□□ -0.62
COL6A2-202ENST00000310645 A8MWV9 139 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms