RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 CCL21O00585 134 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 M0R1W7 72 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 USMG5Q96IX5 58 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 IGHV3OR16-12A0A075B7B8 117 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 LGALS9O00182 355 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 C6orf226Q5I0X4 101 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 USF3Q68DE3 2245 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 COX7CP15954 63 aa8.45□□□□□ -1.06
CPT1A-201ENST00000265641 YLPM1P49750 1951 aaKnown RBP8.45□□□□□ -1.06
CPT1A-201ENST00000265641 BUB1B-PAK6H3BSN5 160 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 C3orf36Q3SXR2 165 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 EGR2P11161 476 aaPredicted RBP8.44□□□□□ -1.06
CPT1A-201ENST00000265641 GATA4P43694 442 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 MRPS36P82909 103 aaKnown RBP8.44□□□□□ -1.06
CPT1A-201ENST00000265641 Q6ZR03 302 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 Q8TCH9 128 aa8.44□□□□□ -1.06
CPT1A-201ENST00000265641 TNRC6AQ8NDV7 1962 aaKnown RBP8.43□□□□□ -1.06
CPT1A-201ENST00000265641 CRLF1O75462 422 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 IGLC6P0CF74 106 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 PRB3Q04118 309 aaPredicted RBP8.43□□□□□ -1.06
CPT1A-201ENST00000265641 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 IGHG3P01860 377 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 PDE6GP18545 87 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 ASPHD1Q5U4P2 390 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 CCDC179H3BU77 68 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 WDR86Q86TI4 376 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 ALPK3Q96L96 1907 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 IGHV1-69P01742 117 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 XGP55808 180 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 LY6EQ16553 131 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 FAM110DQ8TAY7 271 aaPredicted RBP8.43□□□□□ -1.06
CPT1A-201ENST00000265641 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
CPT1A-201ENST00000265641 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
CPT1A-201ENST00000265641 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 TRAV41A0A0B4J266 112 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 ZNF883P0CG24 379 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 ANAPC1Q9H1A4 1944 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 CADP27708 2225 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 TMEM178BH3BS89 294 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 C17orf58Q2M2W7 97 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 ODF3L1Q8IXM7 274 aa8.42□□□□□ -1.06
CPT1A-201ENST00000265641 RNASE6Q93091 150 aaKnown RBP8.42□□□□□ -1.06
CPT1A-201ENST00000265641 A0A087WWL8 130 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 SS18Q15532 418 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 IGFL4Q6B9Z1 124 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 Q8N976 141 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 C1orf195Q5TG92 126 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 ARHGAP21Q5T5U3 1957 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 P0C879 139 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 Q0VFX4 171 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 C1orf159Q96HA4 380 aa8.41□□□□□ -1.06
CPT1A-201ENST00000265641 FRMD6-AS1P0C7T7 363 aa8.4□□□□□ -1.06
CPT1A-201ENST00000265641 NOTCH3Q9UM47 2321 aa8.4□□□□□ -1.06
CPT1A-201ENST00000265641 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
CPT1A-201ENST00000265641 F8WEM9 126 aa8.4□□□□□ -1.06
CPT1A-201ENST00000265641 U3KQK5 164 aa8.4□□□□□ -1.06
CPT1A-201ENST00000265641 IGHV3-11P01762 117 aa8.4□□□□□ -1.07
CPT1A-201ENST00000265641 C3orf56Q8N813 242 aa8.4□□□□□ -1.07
CPT1A-201ENST00000265641 ZNF491Q8N8L2 437 aa8.4□□□□□ -1.07
CPT1A-201ENST00000265641 NUP210Q8TEM1 1887 aaPredicted RBP8.39□□□□□ -1.07
CPT1A-201ENST00000265641 PLXNB3Q9ULL4 1909 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 ZNF134P52741 427 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 LTBP2Q14767 1821 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 NBL1P41271 181 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 PROK2Q9HC23 129 aa8.39□□□□□ -1.07
CPT1A-201ENST00000265641 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 ZFP2Q6ZN57 461 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 SLC25A29Q8N8R3 303 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
CPT1A-201ENST00000265641 ZNRD1Q9P1U0 126 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 PATE2Q6UY27 113 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 NRGNQ92686 78 aa8.38□□□□□ -1.07
CPT1A-201ENST00000265641 TRIOBPQ9H2D6 2365 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 COX7A2LO14548 114 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 ITLN2Q8WWU7 325 aaPredicted RBP8.37□□□□□ -1.07
CPT1A-201ENST00000265641 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 STHQ8IWL8 128 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 MLST8Q9BVC4 326 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 KMT2EQ8IZD2 1858 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 ZNF106Q9H2Y7 1883 aaKnown RBP8.37□□□□□ -1.07
CPT1A-201ENST00000265641 INSP01308 110 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
CPT1A-201ENST00000265641 ZNF503-AS2A6NEH8 195 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms