RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PRB4P10163 310 aaPredicted RBP15.8■□□□□ 0.12
RARA-201ENST00000254066 LOXP28300 417 aaPredicted RBP15.8■□□□□ 0.12
RARA-201ENST00000254066 NUP37Q8NFH4 326 aa15.8■□□□□ 0.12
RARA-201ENST00000254066 Q8TAT8 98 aa15.8■□□□□ 0.12
RARA-201ENST00000254066 FBXL15Q9H469 300 aa15.8■□□□□ 0.12
RARA-201ENST00000254066 Q6Q795 121 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 IGHV4-4A0A075B6R2 117 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 RBAKDNA6NC62 111 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 K7ENP7 123 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 SRSF9Q13242 221 aaKnown RBP eCLIP15.79■□□□□ 0.12
RARA-201ENST00000254066 TOMM6Q96B49 74 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 ARFGEF3Q5TH69 2177 aa15.79■□□□□ 0.12
RARA-201ENST00000254066 TMEM178BH3BS89 294 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 IGLV1-47P01700 117 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 CCL8P80075 99 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 NDUFA11Q86Y39 141 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 PRADC1Q9BSG0 188 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 KAAG1Q9UBP8 84 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 ZNF815PA8K554 130 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 EFNA4P52798 201 aa15.78■□□□□ 0.12
RARA-201ENST00000254066 TCL1BO95988 128 aa15.77■□□□□ 0.12
RARA-201ENST00000254066 COX6B1P14854 86 aa15.77■□□□□ 0.12
RARA-201ENST00000254066 PLXNB1O43157 2135 aa15.77■□□□□ 0.12
RARA-201ENST00000254066 C17orf100A8MU93 164 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 GFRALQ6UXV0 394 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 SCGB1D4Q6XE38 83 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 SCGB3A1Q96QR1 104 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 PIMREGQ9BSJ6 248 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 SMIM2Q9BVW6 85 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 ITPR1Q14643 2758 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 PTPRQQ9UMZ3 2332 aa15.77■□□□□ 0.11
RARA-201ENST00000254066 ZFYVE26Q68DK2 2539 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 ANKRD29Q8N6D5 301 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 BBC3Q96PG8 261 aaPredicted RBP15.76■□□□□ 0.11
RARA-201ENST00000254066 GAGE2BQ13066 116 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 GAGE2EQ4V326 116 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 DNAJC30Q96LL9 226 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 GAGE2DQ9UEU5 116 aa15.76■□□□□ 0.11
RARA-201ENST00000254066 NDUFV3P56181 108 aaKnown RBP15.75■□□□□ 0.11
RARA-201ENST00000254066 ERCC8Q13216 396 aa15.75■□□□□ 0.11
RARA-201ENST00000254066 SCGB1C2P0DMR2 95 aa15.75■□□□□ 0.11
RARA-201ENST00000254066 LYPD2Q6UXB3 125 aa15.75■□□□□ 0.11
RARA-201ENST00000254066 SLC50A1Q9BRV3 221 aa15.75■□□□□ 0.11
RARA-201ENST00000254066 BUB1B-PAK6H3BSN5 160 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 CCDC179H3BU77 68 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 TRGV3P03979 118 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 SEM1Q6ZVN7 128 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 DUX5Q96PT3 197 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 IGFBPL1Q8WX77 278 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 CTSZQ9UBR2 303 aa15.74■□□□□ 0.11
RARA-201ENST00000254066 FAM90A27PA6NNH2 459 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 SNCGO76070 127 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 C10orf126Q8N4M7 172 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 IGKV3D-20A0A0C4DH25 116 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 PAPPA-AS1Q5QFB9 102 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 CFHR4Q92496 578 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 AJUBAQ96IF1 538 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 LINC01600Q96MT4 127 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 SMAD5-AS1Q9Y6J3 95 aa15.73■□□□□ 0.11
RARA-201ENST00000254066 TRAV17A0A0B4J275 112 aa15.72■□□□□ 0.11
RARA-201ENST00000254066 ATP1A1-AS1Q5TC04 95 aa15.72■□□□□ 0.11
RARA-201ENST00000254066 UBTD1Q9HAC8 227 aa15.72■□□□□ 0.11
RARA-201ENST00000254066 INTS1Q8N201 2190 aaKnown RBP15.72■□□□□ 0.11
RARA-201ENST00000254066 IGFL2Q6UWQ7 119 aa15.72■□□□□ 0.11
RARA-201ENST00000254066 IGHV7-4-1A0A0J9YVY3 117 aa15.71■□□□□ 0.11
RARA-201ENST00000254066 LAMA5O15230 3695 aa15.71■□□□□ 0.1
RARA-201ENST00000254066 IFITM1P13164 125 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 DYNAPQ8N1N2 210 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 BAALCQ8WXS3 180 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 PLEKHB2Q96CS7 222 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 VKORC1Q9BQB6 163 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 IGLV11-55A0A075B6I3 123 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 A0A0J9YY99 117 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 HLA-DMBP28068 263 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 TTC32Q5I0X7 151 aa15.7■□□□□ 0.1
RARA-201ENST00000254066 LINC01548A6NM66 108 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 H3BVH4 76 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 SLC25A20O43772 301 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 HERVK_113P61574 105 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 IGSF10Q6WRI0 2623 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 KIR2DL4Q99706 377 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 PRO1854Q9UHT4 67 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 NBEAQ8NFP9 2946 aa15.69■□□□□ 0.1
RARA-201ENST00000254066 TRAV26-2A0A0B4J265 109 aa15.68■□□□□ 0.1
RARA-201ENST00000254066 F8W735 103 aaPredicted RBP15.68■□□□□ 0.1
RARA-201ENST00000254066 CFC1BP0CG36 223 aa15.68■□□□□ 0.1
RARA-201ENST00000254066 CFC1P0CG37 223 aa15.68■□□□□ 0.1
RARA-201ENST00000254066 RASL10AQ92737 203 aa15.68■□□□□ 0.1
RARA-201ENST00000254066 SVILO95425 2214 aa15.68■□□□□ 0.1
RARA-201ENST00000254066 CELSR3Q9NYQ7 3312 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 SUMO2P61956 95 aaKnown RBP15.67■□□□□ 0.1
RARA-201ENST00000254066 SFTA2Q6UW10 78 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 FANCD2OSQ96PS1 177 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 C21orf62Q9NYP8 219 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 IGHV3-30P01768 117 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 IGHV3-30-5P0DP03 117 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 SPANXN1Q5VSR9 72 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 CCL17Q92583 94 aa15.67■□□□□ 0.1
RARA-201ENST00000254066 TRAV8-2A0A0B4J237 113 aa15.66■□□□□ 0.1
RARA-201ENST00000254066 PRR30Q53SZ7 412 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms