RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 DNAH1Q9P2D7 4330 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 CD109Q6YHK3 1445 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 ABCA4P78363 2273 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 LAMA2P24043 3122 aaKnown RBP-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 MYO15AQ9UKN7 3530 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 A0A0J9YY99 117 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 CTXN2P0C2S0 81 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 RPS3P23396 243 aaKnown RBP eCLIP-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 RPL35P42766 123 aaKnown RBP-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 AKR1C8PQ5T2L2 129 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 ZCCHC23Q6ZST2 131 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 GRPEL2Q8TAA5 225 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 OR4C12Q96R67 309 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 EFCAB11Q9BUY7 163 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 LYRM2Q9NU23 88 aaPredicted RBP-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 PRNDQ9UKY0 176 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 ALMS1Q8TCU4 4167 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 NBASA2RRP1 2371 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 PTPRZ1P23471 2315 aaPredicted RBP-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 ACACAQ13085 2346 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 WNK2Q9Y3S1 2297 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 DNAH3Q8TD57 4116 aa-0.03□□□□□ -2.41
AP3S1-209ENST00000640413 FAT2Q9NYQ8 4349 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 HBBP68871 147 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 MRPS25P82663 173 aaKnown RBP-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 FADDQ13158 208 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 LYG2Q86SG7 212 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 OR5AK2Q8NH90 309 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 OR2H1Q9GZK4 316 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 KNTC1P50748 2209 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 CHD9Q3L8U1 2897 aa-0.04□□□□□ -2.42
AP3S1-209ENST00000640413 LPAP08519 4548 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 KALRNO60229 2985 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.05□□□□□ -2.429e-10■■■■■ 36.7
AP3S1-209ENST00000640413 LAMA3Q16787 3333 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 ZFHX4Q86UP3 3567 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 C3orf85A0A1B0GTC6 90 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 C5orf58C9J3I9 102 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 CST7O76096 145 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 FABP4P15090 132 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 HSD11B1P28845 292 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 SNRPD3P62318 126 aaKnown RBP-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 GLYATL3Q5SZD4 288 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 C1orf140Q5VVS0 124 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 XAF1Q6GPH4 301 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 C10orf99Q6UWK7 81 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 OR13C6PQ8NH95 151 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 SS18L2Q9UHA2 77 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 ASB4Q9Y574 426 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 ANK2Q01484 3957 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 FLGP20930 4061 aaPredicted RBP-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 VPS13BQ7Z7G8 4022 aa-0.05□□□□□ -2.42
AP3S1-209ENST00000640413 SACSQ9NZJ4 4579 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 EVI2AP22794 236 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 HACD4Q5VWC8 232 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 LINC00269Q8N2A0 174 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 MCEEQ96PE7 176 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 APC2O95996 2303 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 CELSR3Q9NYQ7 3312 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 LRBAP50851 2863 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 KIAA1107Q9UPP5 1409 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 CELSR1Q9NYQ6 3014 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 SPTBN1Q01082 2364 aaKnown RBP-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 RTL9Q8NET4 1388 aa-0.06□□□□□ -2.42
AP3S1-209ENST00000640413 UNC80Q8N2C7 3258 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 DCHS1Q96JQ0 3298 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 APOBP04114 4563 aaKnown RBP-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 DSPPQ9NZW4 1301 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 BBIP1A8MTZ0 92 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 FXYD1O00168 92 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 SPINK1P00995 79 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 IGHV3-30P01768 117 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 IGHV3-30-5P0DP03 117 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 RPL37P61927 97 aaKnown RBP-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 MRPS36P82909 103 aaKnown RBP-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 RTL8BQ17RB0 113 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 KRTAP6-1Q3LI64 71 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 FKBP1CQ5VVH2 108 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 DHRS4L2Q6PKH6 230 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 C3orf62Q6ZUJ4 267 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 MNS1Q8NEH6 495 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 OR4B1Q8NGF8 309 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 PLEKHB2Q96CS7 222 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 GINS3Q9BRX5 216 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 RTL8AQ9BWD3 113 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 SH3BGRL3Q9H299 93 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 KDM6BO15054 1643 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 NBEAQ8NFP9 2946 aa-0.07□□□□□ -2.42
AP3S1-209ENST00000640413 CSMD1Q96PZ7 3565 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 RBBP6Q7Z6E9 1792 aaKnown RBP-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 A0A1W2PRS3 328 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 TMEM210A6NLX4 147 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 H3BQV1 296 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 KPNA4O00629 521 aaPredicted RBP-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 PIAS1O75925 651 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 IFNA1P01562 189 aa-0.08□□□□□ -2.42
AP3S1-209ENST00000640413 TRACP01848 142 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms