RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 LINC01549A6NIU2 74 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 C9orf139Q6ZV77 190 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 M0R1W7 72 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 FOXE3Q13461 319 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 Q6P435 159 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 PLXND1Q9Y4D7 1925 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 ELANEP08246 267 aa13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 HELZP42694 1942 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-253ENST00000637927 HOXB4P17483 251 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-253ENST00000637927 J3QRE1 110 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 CCL24O00175 119 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 GYPEP15421 78 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 TRGV9Q99603 122 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 TRBV20-1A0A075B6N2 111 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 TRAV9-1A0A075B6T8 112 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
CACNA1A-253ENST00000637927 FAM104BQ5XKR9 115 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 RHODO00212 210 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 WDR83OSQ9Y284 106 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 A0A0G2JRQ6 117 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 LMO1P25800 156 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 CCL18P55774 89 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 TMEM75Q8N9X5 138 aa13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 TSSC4Q9Y5U2 329 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-253ENST00000637927 CASC2Q6XLA1 102 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 SYS1-DBNDD2H3BUS1 97 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 EP300Q09472 2414 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 MED12Q93074 2177 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 IGHV1-69DA0A0B4J2H0 117 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 IGHV1-69P01742 117 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 HEATR5AQ86XA9 2040 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 NDUFS7O75251 213 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 C3orf79P0CE67 100 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 TPSG1Q9NRR2 321 aa13.56□□□□□ -0.24
CACNA1A-253ENST00000637927 HIST1H2BLQ99880 126 aa13.55□□□□□ -0.24
CACNA1A-253ENST00000637927 SRSF2Q01130 221 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-253ENST00000637927 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
CACNA1A-253ENST00000637927 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
CACNA1A-253ENST00000637927 NDUFA12Q9UI09 145 aa13.55□□□□□ -0.24
CACNA1A-253ENST00000637927 LOC105371267A0A1B0GV96 52 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 SS18L2Q9UHA2 77 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 IGKV1-6A0A0C4DH72 117 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 IGHV4-30-2A0A087WSY4 118 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 SDHAF1A6NFY7 115 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 AMBPP02760 352 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 B3GALT5-AS1P59052 145 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 DIAPH2-AS1Q14236 149 aa13.54□□□□□ -0.24
CACNA1A-253ENST00000637927 FOXI1Q12951 378 aa13.53□□□□□ -0.24
CACNA1A-253ENST00000637927 MYLKQ15746 1914 aa13.53□□□□□ -0.24
CACNA1A-253ENST00000637927 IFITM1P13164 125 aa13.53□□□□□ -0.24
CACNA1A-253ENST00000637927 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
CACNA1A-253ENST00000637927 SPTBN2O15020 2390 aa13.53□□□□□ -0.24
CACNA1A-253ENST00000637927 C2orf66Q6UXQ4 117 aa13.52□□□□□ -0.24
CACNA1A-253ENST00000637927 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.24
CACNA1A-253ENST00000637927 SPTBN1Q01082 2364 aaKnown RBP13.52□□□□□ -0.24
CACNA1A-253ENST00000637927 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
CACNA1A-253ENST00000637927 CDKN1BP46527 198 aa13.52□□□□□ -0.25
CACNA1A-253ENST00000637927 ORMDL1Q9P0S3 153 aa13.52□□□□□ -0.25
CACNA1A-253ENST00000637927 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.25
CACNA1A-253ENST00000637927 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 UBE2CO00762 179 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 GP9P14770 177 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 TRAV13-2A0A0B4J235 113 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 K7ENP7 123 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 TSC2P49815 1807 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 HIGD2BQ4VC39 106 aa13.51□□□□□ -0.25
CACNA1A-253ENST00000637927 FNDC1Q4ZHG4 1894 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 C17orf77Q96MU5 243 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 LINC01551Q86U37 167 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 IGLV2-18A0A075B6J9 118 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 CYYR1Q96J86 154 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 Q9H8V8 135 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 FAM110AQ9BQ89 295 aa13.5□□□□□ -0.25
CACNA1A-253ENST00000637927 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 Q86TA4 180 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 SMPXQ9UHP9 88 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 ETV2O00321 342 aaPredicted RBP13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 NDUFB1O75438 58 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 MRPL51Q4U2R6 128 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 BAALC-AS2P0C853 105 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 Q6ZS92 163 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 CYTL1Q9NRR1 136 aa13.49□□□□□ -0.25
CACNA1A-253ENST00000637927 H3BMG7 143 aa13.48□□□□□ -0.25
CACNA1A-253ENST00000637927 HIST3H2BBQ8N257 126 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 WISP1O95388 367 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 Q6ZRM9 215 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 ANKRD29Q8N6D5 301 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 MGAMO43451 1857 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms