RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 CKS2P33552 79 aa11.27□□□□□ -0.61
CDKN1A-208ENST00000615513 IGSF10Q6WRI0 2623 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 PF4V1P10720 104 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 Q6ZVH6 145 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 CFHR3Q02985 330 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 OR4X2Q8NGF9 303 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 NPFFR1Q9GZQ6 430 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
CDKN1A-208ENST00000615513 RNF185Q96GF1 192 aa11.25□□□□□ -0.61
CDKN1A-208ENST00000615513 LINC00477Q96M19 166 aa11.25□□□□□ -0.61
CDKN1A-208ENST00000615513 SOCS3O14543 225 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 USP9XQ93008 2570 aaPredicted RBP11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 A0A096LNJ9 63 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 J3QLI3 93 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 OVOL1O14753 267 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 Q6ZS46 218 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 MSRB1Q9NZV6 116 aa11.24□□□□□ -0.61
CDKN1A-208ENST00000615513 A0A096LNT2 108 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 NPYP01303 97 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 VPS13CQ709C8 3753 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 hDV102S1A0JD36 115 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 FAM106AQ4KMX7 169 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 NRGNQ92686 78 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 MS4A6AQ9H2W1 248 aa11.23□□□□□ -0.61
CDKN1A-208ENST00000615513 SPG11Q96JI7 2443 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 IGHV7-4-1A0A0J9YVY3 117 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 ACACBO00763 2458 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 LOXL1Q08397 574 aaPredicted RBP11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
CDKN1A-208ENST00000615513 IGHV4-4A0A075B6R2 117 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 K7EP13 123 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 SNAI2O43623 268 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 HBDP02042 147 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 COX6B1P14854 86 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 PCP4P48539 62 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 PRSS57Q6UWY2 283 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 DAZ1Q9NQZ3 744 aaKnown RBP11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 FLNCQ14315 2725 aa11.21□□□□□ -0.61
CDKN1A-208ENST00000615513 K7EMT4 169 aa11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 CACNG7P62955 275 aa11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 FOXE3Q13461 319 aa11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 MPV17L2Q567V2 206 aa11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 TIMM8BQ9Y5J9 83 aaPredicted RBP11.21□□□□□ -0.62
CDKN1A-208ENST00000615513 TRBV7-9A0A0J9YWB2 115 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 NCR2O95944 276 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 NXT2Q9NPJ8 142 aaKnown RBP11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 NUDT3O95989 172 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 PSMB8P28062 276 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 VAMP3Q15836 100 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
CDKN1A-208ENST00000615513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.621e-8■■□□□ 12.4
CDKN1A-208ENST00000615513 H0Y8G0 127 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 BVES-AS1Q5T3Y7 98 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 SAMD13Q5VXD3 122 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 LCNL1Q6ZST4 164 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
CDKN1A-208ENST00000615513 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 TNFRSF6BO95407 300 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 LGALS9BQ3B8N2 356 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 PRR9Q5T870 116 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 LGALS9CQ6DKI2 356 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 RBX1P62877 108 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 APRG1Q8IVJ8 170 aa11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
CDKN1A-208ENST00000615513 TAX1BP3O14907 124 aa11.17□□□□□ -0.62
CDKN1A-208ENST00000615513 PRB1P04280 392 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms