RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RNASE4P34096 147 aaKnown RBP2.6□□□□□ -1.99
LIG4-205ENST00000614526 FXYD7P58549 80 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 HBBP68871 147 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 ZNF124Q15973 351 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 PMCHL1Q16048 86 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 FAM209BQ5JX69 171 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 SAPCD1Q5SSQ6 148 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 FOXC2Q99958 501 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 GNB1LQ9BYB4 327 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 SAMD10Q9BYL1 202 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 ZNF492Q9P255 531 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 F8P00451 2351 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 TRAV12-2A0A075B6T6 113 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 ELANEP08246 267 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 LGALS1P09382 135 aaKnown RBP2.6□□□□□ -1.99
LIG4-205ENST00000614526 CD28P10747 220 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 LINC00310P59036 64 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 TWIST1Q15672 202 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 WDR73Q6P4I2 378 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 MS4A6AQ9H2W1 248 aa2.6□□□□□ -1.99
LIG4-205ENST00000614526 A0A087X0K7 114 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 LOC389332A0A1B0GUA5 103 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 A0A1B0GUT8 65 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 FABP5P3A8MUU1 101 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 INAFM1C9JVW0 142 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 SMKR1H3BMG3 65 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 CD5LO43866 347 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 HLA-DQA1P01909 254 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 GPX1P07203 203 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 RNASEKQ6P5S7 137 aaKnown RBP2.59□□□□□ -1.99
LIG4-205ENST00000614526 OR10J6PQ8NGY7 276 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 DLX4Q92988 240 aaPredicted RBP2.59□□□□□ -1.99
LIG4-205ENST00000614526 UBE2E2Q96LR5 201 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 UFC1Q9Y3C8 167 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 ATRQ13535 2644 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 TRAV9-1A0A075B6T8 112 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 IGKV3D-20A0A0C4DH25 116 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 C2orf70A6NJV1 201 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 A8MWP6 167 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 NPIPB6E9PJ23 425 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 M0R2Z0 102 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 NCR2O95944 276 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 SCGB1D1O95968 90 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 PRM2P04554 102 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 S100A8P05109 93 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 AMTP48728 403 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 NSUN5P1Q3KNT7 163 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 ADAMTSL5Q6ZMM2 481 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 OR1N2Q8NGR9 330 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 DEFB104AQ8WTQ1 72 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 CITED2Q99967 270 aaPredicted RBP2.59□□□□□ -1.99
LIG4-205ENST00000614526 PRO1933Q9H354 126 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 PPP1R14DQ9NXH3 145 aa2.59□□□□□ -1.99
LIG4-205ENST00000614526 A0A1B0GXF2 115 aa2.59□□□□□ -2
LIG4-205ENST00000614526 SOCS3O14543 225 aa2.59□□□□□ -2
LIG4-205ENST00000614526 GNRH2O43555 120 aa2.59□□□□□ -2
LIG4-205ENST00000614526 GAS8-AS1O95177 125 aa2.59□□□□□ -2
LIG4-205ENST00000614526 BMI1P35226 326 aa2.59□□□□□ -2
LIG4-205ENST00000614526 ZNF575Q86XF7 245 aa2.59□□□□□ -2
LIG4-205ENST00000614526 FER1L6-AS1Q8NA97 138 aa2.59□□□□□ -2
LIG4-205ENST00000614526 OR8A1Q8NGG7 326 aa2.59□□□□□ -2
LIG4-205ENST00000614526 LINC01006Q8NI28 216 aa2.59□□□□□ -2
LIG4-205ENST00000614526 C18orf32Q8TCD1 76 aa2.59□□□□□ -2
LIG4-205ENST00000614526 TMEM18Q96B42 140 aa2.59□□□□□ -2
LIG4-205ENST00000614526 BORCS7Q96B45 105 aa2.59□□□□□ -2
LIG4-205ENST00000614526 SMIM12Q96EX1 92 aa2.59□□□□□ -2
LIG4-205ENST00000614526 TRAV12-3A0A0B4J271 114 aa2.58□□□□□ -2
LIG4-205ENST00000614526 KNCNA6PVL3 124 aa2.58□□□□□ -2
LIG4-205ENST00000614526 H0Y8G0 127 aa2.58□□□□□ -2
LIG4-205ENST00000614526 H3BVH4 76 aa2.58□□□□□ -2
LIG4-205ENST00000614526 M0R381 172 aa2.58□□□□□ -2
LIG4-205ENST00000614526 MT-ND6P03923 174 aa2.58□□□□□ -2
LIG4-205ENST00000614526 KRTDAPP60985 99 aa2.58□□□□□ -2
LIG4-205ENST00000614526 RIGQ13278 110 aa2.58□□□□□ -2
LIG4-205ENST00000614526 DCANP1Q8TF63 244 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ALKBH7Q9BT30 221 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 MCRIP2Q9BUT9 160 aaKnown RBP2.58□□□□□ -2
LIG4-205ENST00000614526 RNF114Q9Y508 228 aa2.58□□□□□ -2
LIG4-205ENST00000614526 LINC01619G3V211 115 aa2.58□□□□□ -2
LIG4-205ENST00000614526 BRI3O95415 125 aa2.58□□□□□ -2
LIG4-205ENST00000614526 GATA1P15976 413 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 S100A4P26447 101 aaKnown RBP2.58□□□□□ -2
LIG4-205ENST00000614526 SPINK13Q1W4C9 94 aa2.58□□□□□ -2
LIG4-205ENST00000614526 CT83Q5H943 113 aa2.58□□□□□ -2
LIG4-205ENST00000614526 APRG1Q8IVJ8 170 aa2.58□□□□□ -2
LIG4-205ENST00000614526 TMEM61Q8N0U2 210 aa2.58□□□□□ -2
LIG4-205ENST00000614526 OR10AG1Q8NH19 301 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 ZNF580Q9UK33 172 aa2.58□□□□□ -2
LIG4-205ENST00000614526 NSD1Q96L73 2696 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 LOC102724200A0A096LPH7 203 aaPredicted RBP2.58□□□□□ -2
LIG4-205ENST00000614526 TRAV26-2A0A0B4J265 109 aa2.58□□□□□ -2
LIG4-205ENST00000614526 TRBV6-1A0A0K0K1D8 114 aa2.58□□□□□ -2
LIG4-205ENST00000614526 D6R8Y8 96 aa2.58□□□□□ -2
LIG4-205ENST00000614526 K7EMT4 169 aa2.58□□□□□ -2
LIG4-205ENST00000614526 HSBP1O75506 76 aa2.58□□□□□ -2
LIG4-205ENST00000614526 SMIM6P0DI80 62 aa2.58□□□□□ -2
LIG4-205ENST00000614526 EVI2AP22794 236 aa2.58□□□□□ -2
LIG4-205ENST00000614526 ID1P41134 155 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms