RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TCEAL2Q9H3H9 227 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 UTP11Q9Y3A2 253 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 C22orf24Q9Y442 160 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 LAMA5O15230 3695 aa1.25□□□□□ -2.21
SMCHD1-205ENST00000581383 SPENQ96T58 3664 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 PTPN13Q12923 2485 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 DOPEY1Q5JWR5 2465 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 NCOA6Q14686 2063 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 TRAV4A0A0B4J268 109 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 PROSCO94903 275 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 ATP5G3P48201 142 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 HSPE1P61604 102 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 KRR1Q13601 381 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 DEFB133Q30KQ1 61 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 LYG2Q86SG7 212 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 OR10J5Q8NHC4 309 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 FAM172AQ8WUF8 416 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 SFT2D1Q8WV19 159 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 MED29Q9NX70 200 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 MYH6P13533 1939 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 CEP192Q8TEP8 1941 aa1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 MUC22E2RYF6 1773 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-205ENST00000581383 CNOT1A5YKK6 2376 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 NBPF19A0A087WUL8 3843 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 TRAV12-1A0A0B4J245 112 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 FAM92AA1XBS5 289 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 C7orf71A4D174 169 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 J3QRK9 145 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 ATG12O94817 140 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 C1QBP02746 253 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 PIGPP57054 158 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 DEFB113Q30KQ7 82 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 LYRM7Q5U5X0 104 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 C22orf39Q6P5X5 142 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 DEFB106AQ8N104 65 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 CCL4L1Q8NHW4 92 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 NAT14Q8WUY8 206 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 PATE1Q8WXA2 126 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 RNF122Q9H9V4 155 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 PARVBQ9HBI1 364 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 GID8Q9NWU2 228 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 SS18L2Q9UHA2 77 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 HS3ST2Q9Y278 367 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 U3KQA8 63 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 ANKRD17O75179 2603 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 HECTD1Q9ULT8 2610 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 CACNA1EQ15878 2313 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 DENND4CQ5VZ89 1909 aa1.23□□□□□ -2.21
SMCHD1-205ENST00000581383 CFAP46Q8IYW2 2715 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 ITPR3Q14573 2671 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TRBV6-7A0A0A0MS04 114 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TRBV6-8A0A0A6YYG3 113 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 PVALEFA0A1B0GWK0 134 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TNFSF15O95150 251 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 CCL4P13236 92 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TAS2R41P59536 307 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 MAXP61244 160 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 NCALDP61601 193 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 ESRGQ1W209 222 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TMED4Q7Z7H5 227 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 FAM19A2Q8N3H0 131 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 SMIM20Q8N5G0 67 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 OR2T10Q8NGZ9 312 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 PRRT1Q99946 306 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TMEM133Q9H2Q1 129 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 BCL2L10Q9HD36 194 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 MRPL40Q9NQ50 206 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 IGSF10Q6WRI0 2623 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 LAMA1P25391 3075 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 C2CD3Q4AC94 2353 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 TENM4Q6N022 2769 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 APC2O95996 2303 aa1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 DSPP15924 2871 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-205ENST00000581383 F5P12259 2224 aa1.21□□□□□ -2.21
SMCHD1-205ENST00000581383 MYO9AB2RTY4 2548 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 NBEAQ8NFP9 2946 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 NUP210Q8TEM1 1887 aaPredicted RBP1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 E5RI56 91 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 IFNA1P01562 189 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 PIRTP0C851 137 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 GNG5P63218 68 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 EIF5AP63241 154 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 EXOC3-AS1Q8N2X6 119 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 STAG3L4Q8TBR4 150 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 NEK7Q8TDX7 302 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 SLAMF6Q96DU3 332 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 MCEEQ96PE7 176 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 MRPL57Q9BQC6 102 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 C6orf62Q9GZU0 229 aaPredicted RBP1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 ACER3Q9NUN7 267 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 PYCARDQ9ULZ3 195 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 DMXL2Q8TDJ6 3036 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 SCN3AQ9NY46 2000 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 KIAA1549LQ6ZVL6 1849 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 KALRNO60229 2985 aa1.21□□□□□ -2.22
SMCHD1-205ENST00000581383 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms