RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TRBV7-9A0A0J9YWB2 115 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 HIST1H1AQ02539 215 aaPredicted RBP21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 DEFB136Q30KP8 78 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 LINC01006Q8NI28 216 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 APCSP02743 223 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 SLURP1P55000 103 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 DPF1Q92782 380 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 MS4A6AQ9H2W1 248 aa21.41■■□□□ 1.02
CTDNEP1-210ENST00000574322 Q0VG73 95 aa21.4■■□□□ 1.02
CTDNEP1-210ENST00000574322 LINC01559Q495D7 138 aa21.4■■□□□ 1.02
CTDNEP1-210ENST00000574322 OR8A1Q8NGG7 326 aa21.4■■□□□ 1.02
CTDNEP1-210ENST00000574322 A0A1B0GUT8 65 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 A0A1B0GW15 77 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 NDUFA7O95182 113 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 ZNF575Q86XF7 245 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 LINC00518Q8N0U6 118 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 KLHL30-AS1Q8NEE0 82 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 FAM19A4Q96LR4 140 aa21.39■■□□□ 1.01
CTDNEP1-210ENST00000574322 IGKV3-7A0A075B6H7 116 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 M0QZ24 198 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 CRISP2P16562 243 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 CAMPP49913 170 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 SLAQ13239 276 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 ADAMTSL5Q6ZMM2 481 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 GATD1Q8NB37 220 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 PEMTQ9UBM1 199 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 K7EQG2 157 aa21.38■■□□□ 1.01
CTDNEP1-210ENST00000574322 RIGQ13278 110 aa21.37■■□□□ 1.01
CTDNEP1-210ENST00000574322 KHDC1LQ5JSQ8 128 aa21.37■■□□□ 1.01
CTDNEP1-210ENST00000574322 ZNF705DP0CH99 300 aaPredicted RBP21.36■■□□□ 1.01
CTDNEP1-210ENST00000574322 ZNF705BP0CI00 300 aaPredicted RBP21.36■■□□□ 1.01
CTDNEP1-210ENST00000574322 IGLC6P0CF74 106 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 APRG1Q8IVJ8 170 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 OR9G4Q8NGQ1 327 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 S100A2P29034 98 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 OR10J3Q5JRS4 329 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 ZFAND2AQ8N6M9 145 aa21.35■■□□□ 1.01
CTDNEP1-210ENST00000574322 ARMS2P0C7Q2 107 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 CTRLP40313 264 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 FHL3Q13643 280 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 HIST1H2BLQ99880 126 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 SELENOKQ9Y6D0 94 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 C2CD3Q4AC94 2353 aa21.34■■□□□ 1.01
CTDNEP1-210ENST00000574322 GRIFINA4D1Z8 144 aa21.33■■□□□ 1.01
CTDNEP1-210ENST00000574322 ORM1P02763 201 aa21.33■■□□□ 1.01
CTDNEP1-210ENST00000574322 KIAA1644Q3SXP7 199 aa21.33■■□□□ 1.01
CTDNEP1-210ENST00000574322 PDZD11Q5EBL8 140 aa21.33■■□□□ 1.01
CTDNEP1-210ENST00000574322 TP53TG3Q9ULZ0 132 aa21.33■■□□□ 1.01
CTDNEP1-210ENST00000574322 TMSB15BA0A087X1C1 80 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 CD28P10747 220 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 ESDP10768 282 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 SNRPD3P62318 126 aaKnown RBP21.32■■□□□ 1
CTDNEP1-210ENST00000574322 LYZL1Q6UWQ5 148 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 DLX4Q92988 240 aaPredicted RBP21.32■■□□□ 1
CTDNEP1-210ENST00000574322 BORCS7Q96B45 105 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 WFDC3Q8IUB2 231 aa21.32■■□□□ 1
CTDNEP1-210ENST00000574322 TRAV2A0A0B4J234 112 aa21.31■■□□□ 1
CTDNEP1-210ENST00000574322 F6UB75 175 aa21.31■■□□□ 1
CTDNEP1-210ENST00000574322 SMIM6P0DI80 62 aa21.31■■□□□ 1
CTDNEP1-210ENST00000574322 DEFB1P60022 68 aa21.31■■□□□ 1
CTDNEP1-210ENST00000574322 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.31■■□□□ 1
CTDNEP1-210ENST00000574322 SSBP4Q9BWG4 385 aaPredicted RBP21.31■■□□□ 1
CTDNEP1-210ENST00000574322 C11orf21Q9P2W6 132 aa21.31■■□□□ 1
CTDNEP1-210ENST00000574322 TSSC4Q9Y5U2 329 aaPredicted RBP21.31■■□□□ 1
CTDNEP1-210ENST00000574322 IGKV3D-20A0A0C4DH25 116 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 CSN3P07498 182 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 SRIP30626 198 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 TMEM256Q8N2U0 113 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 FER1L6-AS1Q8NA97 138 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 RAX2Q96IS3 184 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 CNFNQ9BYD5 112 aa21.3■■□□□ 1
CTDNEP1-210ENST00000574322 AMBPP02760 352 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 PAFAH1B2P68402 229 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 PRR9Q5T870 116 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 ZNF493Q6ZR52 646 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 DUX3Q96PT4 197 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 FABP4P15090 132 aa21.29■■□□□ 1
CTDNEP1-210ENST00000574322 ALKBH7Q9BT30 221 aaPredicted RBP21.29■■□□□ 1
CTDNEP1-210ENST00000574322 A0A1B0GUS0 222 aa21.28■■□□□ 1
CTDNEP1-210ENST00000574322 LINC00310P59036 64 aa21.28■■□□□ 1
CTDNEP1-210ENST00000574322 ODF3Q96PU9 254 aa21.28■■□□□ 1
CTDNEP1-210ENST00000574322 ATRQ13535 2644 aa21.27■■□□□ 1
CTDNEP1-210ENST00000574322 RIPPLY3P57055 190 aa21.27■■□□□ 1
CTDNEP1-210ENST00000574322 KRTAP24-1Q3LI83 254 aa21.27■■□□□ 1
CTDNEP1-210ENST00000574322 CITED2Q99967 270 aaPredicted RBP21.27■■□□□ 1
CTDNEP1-210ENST00000574322 F2Z2F3 143 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 ZNF688P0C7X2 276 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 TFPI2P48307 235 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 PSMG4Q5JS54 123 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 OR10D4PQ8NGN7 298 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 TPPP3Q9BW30 176 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 TRAV21A0A0B4J279 112 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 NUPR1O60356 82 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 PROK1P58294 105 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 BAGE3Q86Y29 109 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 TMEM18Q96B42 140 aa21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 PACRGQ96M98 296 aaPredicted RBP21.26■□□□□ 0.99
CTDNEP1-210ENST00000574322 LOC102724200A0A096LPH7 203 aaPredicted RBP21.25■□□□□ 0.99
CTDNEP1-210ENST00000574322 A0A0J9YX75 114 aa21.25■□□□□ 0.99
CTDNEP1-210ENST00000574322 CCL24O00175 119 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms