RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 PRSS29PA6NIE9 313 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 IGLL5B9A064 214 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 TCTEX1D4Q5JR98 221 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
TSC2-222ENST00000568454 ZSWIM8A7E2V4 1837 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 SCRT2Q9NQ03 307 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 E7EQL1 145 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 DOCK9Q9BZ29 2069 aa13.19□□□□□ -0.3
TSC2-222ENST00000568454 ZDBF2Q9HCK1 2354 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 ZNF561-AS1K7EIQ3 104 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 RHOHQ15669 191 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 PHF3Q92576 2039 aaKnown RBP13.18□□□□□ -0.3
TSC2-222ENST00000568454 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 DOPEY2Q9Y3R5 2298 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 IGHV3-16A0A0C4DH30 117 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
TSC2-222ENST00000568454 Q6ZS92 163 aa13.17□□□□□ -0.3
TSC2-222ENST00000568454 RLFQ13129 1914 aa13.17□□□□□ -0.3
TSC2-222ENST00000568454 LOXP28300 417 aaPredicted RBP13.17□□□□□ -0.3
TSC2-222ENST00000568454 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
TSC2-222ENST00000568454 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
TSC2-222ENST00000568454 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
TSC2-222ENST00000568454 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
TSC2-222ENST00000568454 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
TSC2-222ENST00000568454 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
TSC2-222ENST00000568454 ZNF134P52741 427 aa13.16□□□□□ -0.3
TSC2-222ENST00000568454 BPESC1Q9GZL8 116 aa13.16□□□□□ -0.3
TSC2-222ENST00000568454 TPSG1Q9NRR2 321 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 EP300Q09472 2414 aaPredicted RBP13.15□□□□□ -0.3
TSC2-222ENST00000568454 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
TSC2-222ENST00000568454 SH2D6Q7Z4S9 175 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 Q8NFD4 153 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 TRAV12-1A0A0B4J245 112 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 NXPH4O95158 308 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 NKAPP1Q8N9T2 125 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 SCN5AQ14524 2016 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 G3V318 75 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 ZNF491Q8N8L2 437 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 RNASE8Q8TDE3 154 aaKnown RBP13.15□□□□□ -0.3
TSC2-222ENST00000568454 POLEQ07864 2286 aa13.15□□□□□ -0.3
TSC2-222ENST00000568454 BAALC-AS2P0C853 105 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 PI4KAP42356 2102 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 IGHV3-38A0A0C4DH36 116 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 UNQ6494/PRO21346Q6UXR6 183 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
TSC2-222ENST00000568454 LENEPQ9Y5L5 61 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 RBAKDNA6NC62 111 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 ARTNQ5T4W7 220 aa13.14□□□□□ -0.31
TSC2-222ENST00000568454 TRPM7Q96QT4 1865 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 NUPR1O60356 82 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 LY6HO94772 140 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 PRSS47A8MTI9 375 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 PSCAO43653 123 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 EGR2P11161 476 aaPredicted RBP13.13□□□□□ -0.31
TSC2-222ENST00000568454 LINC01356Q8N9X3 169 aa13.13□□□□□ -0.31
TSC2-222ENST00000568454 MYO7BQ6PIF6 2116 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 GATA3P23771 443 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 TEN1Q86WV5 123 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 ANKRD39Q53RE8 183 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
TSC2-222ENST00000568454 LINC01619G3V211 115 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 WISP1O95388 367 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 HEATR1Q9H583 2144 aaKnown RBP13.12□□□□□ -0.31
TSC2-222ENST00000568454 CFHR4Q92496 578 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 ORMDL1Q9P0S3 153 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
TSC2-222ENST00000568454 SMIM20Q8N5G0 67 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 FER1L5A0AVI2 2057 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 TRAV12-2A0A075B6T6 113 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 SBF1O95248 1867 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
TSC2-222ENST00000568454 TDRG1Q3Y452 100 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 C8orf31Q8N9H6 132 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 HERV-K104P63124 156 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 RUSC1-AS1Q66K80 236 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 ATOX1O00244 68 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 IGLV1-44P01699 117 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 TRIOBPQ9H2D6 2365 aa13.1□□□□□ -0.31
TSC2-222ENST00000568454 IGLV3-9A0A075B6K5 115 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 CFHR3Q02985 330 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 CR1LQ2VPA4 569 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 RNF114Q9Y508 228 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 TAX1BP3O14907 124 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 LY6DQ14210 128 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
TSC2-222ENST00000568454 MSMBP08118 114 aa13.08□□□□□ -0.32
TSC2-222ENST00000568454 DAD1P61803 113 aa13.08□□□□□ -0.32
TSC2-222ENST00000568454 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms