RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 TMEM8BA6NDV4 472 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 BVES-AS1Q5T3Y7 98 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 IGHV4-38-2P0DP08 117 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 C10orf105Q8TEF2 133 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 IFI27L1Q96BM0 104 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 IGSF10Q6WRI0 2623 aa15.29■□□□□ 0.04
MSLN-205ENST00000563941 TNFRSF6BO95407 300 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 TRBV12-3P01733 135 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 LY6EQ16553 131 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 IGF1P05019 195 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 FOXE3Q13461 319 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 UNQ9165/PRO28630Q6UXU0 137 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 C12orf54Q6X4T0 127 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 C9orf139Q6ZV77 190 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 DPF1Q92782 380 aa15.28■□□□□ 0.04
MSLN-205ENST00000563941 LINC01546A6NGU7 62 aa15.27■□□□□ 0.04
MSLN-205ENST00000563941 EVI2AP22794 236 aa15.27■□□□□ 0.04
MSLN-205ENST00000563941 ANKRD39Q53RE8 183 aa15.27■□□□□ 0.04
MSLN-205ENST00000563941 NPFFR1Q9GZQ6 430 aa15.27■□□□□ 0.04
MSLN-205ENST00000563941 PPP1R14DQ9NXH3 145 aa15.27■□□□□ 0.04
MSLN-205ENST00000563941 ACACBO00763 2458 aa15.27■□□□□ 0.03
MSLN-205ENST00000563941 IGHV7-4-1A0A0J9YVY3 117 aa15.26■□□□□ 0.03
MSLN-205ENST00000563941 SMAD7O15105 426 aaKnown RBP15.26■□□□□ 0.03
MSLN-205ENST00000563941 Q6ZQT7 251 aa15.26■□□□□ 0.03
MSLN-205ENST00000563941 C20orf173Q96LM9 149 aa15.26■□□□□ 0.03
MSLN-205ENST00000563941 ZFHX3Q15911 3703 aa15.26■□□□□ 0.03
MSLN-205ENST00000563941 GATA1P15976 413 aaPredicted RBP15.26■□□□□ 0.03
MSLN-205ENST00000563941 C2orf91Q6ZV80 131 aa15.26■□□□□ 0.03
MSLN-205ENST00000563941 NXT2Q9NPJ8 142 aaKnown RBP15.26■□□□□ 0.03
MSLN-205ENST00000563941 H3BUX3 64 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 NDUFA4O00483 81 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 WFDC3Q8IUB2 231 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 NDUFS8O00217 210 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 SNAI2O43623 268 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 FOSL1P15407 271 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 PTTG1IPP53801 180 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 CLEC2AQ6UVW9 174 aa15.25■□□□□ 0.03
MSLN-205ENST00000563941 CCL25O15444 150 aa15.24■□□□□ 0.03
MSLN-205ENST00000563941 IGHG2P01859 326 aa15.24■□□□□ 0.03
MSLN-205ENST00000563941 GPHB5Q86YW7 130 aa15.24■□□□□ 0.03
MSLN-205ENST00000563941 OR1N2Q8NGR9 330 aa15.24■□□□□ 0.03
MSLN-205ENST00000563941 IGHV4-30-2A0A087WSY4 118 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 A6NDX4 124 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 FGF6P10767 208 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 LEPP41159 167 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 PRR9Q5T870 116 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 C18orf15Q96N68 181 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 H3BUA1 57 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 IGHV3-11P01762 117 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 FCER1GP30273 86 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 ATP5J2P56134 94 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 UBE2V1Q13404 147 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 SMIM15Q7Z3B0 74 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 DEFB125Q8N687 156 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 USMG5Q96IX5 58 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 LENEPQ9Y5L5 61 aa15.23■□□□□ 0.03
MSLN-205ENST00000563941 TAX1BP3O14907 124 aa15.22■□□□□ 0.03
MSLN-205ENST00000563941 SPTAN1Q13813 2472 aaKnown RBP15.22■□□□□ 0.03
MSLN-205ENST00000563941 BRI3O95415 125 aa15.22■□□□□ 0.03
MSLN-205ENST00000563941 OR2K2Q8NGT1 345 aa15.22■□□□□ 0.03
MSLN-205ENST00000563941 UFC1Q9Y3C8 167 aa15.22■□□□□ 0.03
MSLN-205ENST00000563941 SOCS3O14543 225 aa15.21■□□□□ 0.03
MSLN-205ENST00000563941 SPANXN1Q5VSR9 72 aa15.21■□□□□ 0.03
MSLN-205ENST00000563941 KLK15Q9H2R5 256 aa15.21■□□□□ 0.03
MSLN-205ENST00000563941 DKK2Q9UBU2 259 aa15.21■□□□□ 0.03
MSLN-205ENST00000563941 FLNCQ14315 2725 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 IGHV4-4A0A075B6R2 117 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 MSMBP08118 114 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 PF4V1P10720 104 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 TCTAP57738 103 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 Q8N8P6 123 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 CELSR1Q9NYQ6 3014 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 IGLV2-18A0A075B6J9 118 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 H3BVH4 76 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 J3KRW8 73 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 BLCAPP62952 87 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 LINC00477Q96M19 166 aa15.2■□□□□ 0.02
MSLN-205ENST00000563941 VPS13CQ709C8 3753 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 Q6ZS46 218 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 BOD1L2Q8IYS8 172 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 OR4X2Q8NGF9 303 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 OR10J6PQ8NGY7 276 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 COL12A1Q99715 3063 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 TRAV26-2A0A0B4J265 109 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 OVOL1O14753 267 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 ERASQ7Z444 233 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 ZFAND2AQ8N6M9 145 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 NRACQ8N912 160 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 TMEM158Q8WZ71 300 aa15.19■□□□□ 0.02
MSLN-205ENST00000563941 VAMP3Q15836 100 aa15.18■□□□□ 0.02
MSLN-205ENST00000563941 CD5LO43866 347 aa15.17■□□□□ 0.02
MSLN-205ENST00000563941 DEFB1P60022 68 aa15.17■□□□□ 0.02
MSLN-205ENST00000563941 LCNL1Q6ZST4 164 aa15.17■□□□□ 0.02
MSLN-205ENST00000563941 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
MSLN-205ENST00000563941 TMEM97Q5BJF2 176 aa15.17■□□□□ 0.02
MSLN-205ENST00000563941 PRSS47A8MTI9 375 aa15.16■□□□□ 0.02
MSLN-205ENST00000563941 ODF1Q14990 250 aa15.16■□□□□ 0.02
MSLN-205ENST00000563941 TRAV21A0A0B4J279 112 aa15.16■□□□□ 0.02
MSLN-205ENST00000563941 CBY3A6NI87 242 aa15.16■□□□□ 0.02
MSLN-205ENST00000563941 IGLV1-40P01703 118 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms