RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TMEM61Q8N0U2 210 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 ADAMTSL1Q8N6G6 1762 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 SAA4P35542 130 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 TMEM256-PLSCR3K7ERE1 68 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 A0A096LPF7 62 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 MBD3L4A6NDZ8 208 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 MBD3L3A6NE82 208 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 MBD3L5A6NJ08 208 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 NDUFS7O75251 213 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 Q6ZWC4 215 aa11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 MBD3L2Q8NHZ7 208 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P12-202ENST00000559989 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 CD177Q8N6Q3 437 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 TRBV6-6A0A0A6YYG2 114 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 IGKV1D-8A0A087WSZ0 117 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 FAM110DQ8TAY7 271 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 CR1LQ2VPA4 569 aa11.11□□□□□ -0.63
CSPG4P12-202ENST00000559989 EFNA2O43921 213 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 CXCL5P42830 114 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 SBF1O95248 1867 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 UBR3Q6ZT12 1888 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 WIPF2Q8TF74 440 aaPredicted RBP11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 NDUFA4O00483 81 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 Q9HAA7 133 aa11.1□□□□□ -0.63
CSPG4P12-202ENST00000559989 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 CRYGBP07316 175 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 ABCA1O95477 2261 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 J3QRE1 110 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
CSPG4P12-202ENST00000559989 TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 USP17L23D6RBM5 183 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 LINC00473A8K010 186 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 COX7A2LO14548 114 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 SEM1Q6ZVN7 128 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 C3orf22Q8N5N4 141 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 TMEM14CQ9P0S9 112 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 CADP27708 2225 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 CCL25O15444 150 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 ALPK2Q86TB3 2170 aa11.08□□□□□ -0.64
CSPG4P12-202ENST00000559989 MAP1BP46821 2468 aaKnown RBP11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 PDE6GP18545 87 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 FAM231DQ6ZW35 169 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 PRDM6Q9NQX0 595 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 Q6ZQT7 251 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 DKK2Q9UBU2 259 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 CEP250Q9BV73 2442 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 PRR25Q96S07 402 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 HELZP42694 1942 aaKnown RBP11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 MED12Q93074 2177 aa11.07□□□□□ -0.64
CSPG4P12-202ENST00000559989 A0A0U1RQV1 116 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 C5orf63A6NC05 138 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 ATP6V0E1O15342 81 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 C11orf52Q96A22 123 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 CRYGSP22914 178 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 HIST2H2BCQ6DN03 193 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 GFI1Q99684 422 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 V9GYV3 84 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 Q6P435 159 aa11.06□□□□□ -0.64
CSPG4P12-202ENST00000559989 WIPF3A6NGB9 483 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 CFHR1Q03591 330 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 WFDC11Q8NEX6 87 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 H3BRN7 92 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 A0A087WW49 117 aa11.05□□□□□ -0.64
CSPG4P12-202ENST00000559989 B9D2Q9BPU9 175 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms