RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 NPYP01303 97 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 NDUFA12Q9UI09 145 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 FREM3P0C091 2139 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 TRAV13-2A0A0B4J235 113 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 NDUFC2-KCTD14E9PQ53 114 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 NBL1P41271 181 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 TRAV26-2A0A0B4J265 109 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 SMIM27A0A1W2PRY6 76 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 HLA-DRB4P13762 266 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 HLA-DRB4X5D2U9 266 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 A0A0B4J2C4 111 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 E7EQL1 145 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 LY6HO94772 140 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 GATA3P23771 443 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 V9GYV3 84 aa7.96□□□□□ -1.14
COL4A6-208ENST00000538570 SHISA9B4DS77 424 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 ZNRF2Q8NHG8 242 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 NXPH4O95158 308 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 PAX9P55771 341 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 RBX1P62877 108 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 ZNRD1Q9P1U0 126 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 TP53BP1Q12888 1972 aaPredicted RBP7.95□□□□□ -1.14
COL4A6-208ENST00000538570 MPDZO75970 2070 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 PSMB8P28062 276 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 FOXI2Q6ZQN5 318 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 ZNF833PQ6ZTB9 187 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 LCTP09848 1927 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 SDK2Q58EX2 2172 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 IGKV3D-7A0A0C4DH55 119 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 MSMBP08118 114 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 FAM231DQ6ZW35 169 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 TAX1BP3O14907 124 aa7.95□□□□□ -1.14
COL4A6-208ENST00000538570 IGKV1-6A0A0C4DH72 117 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 WIPF3A6NGB9 483 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 H3BRN7 92 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 LRRK1Q38SD2 2015 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 PRR25Q96S07 402 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 DOCK9Q9BZ29 2069 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 HERVK_113P63121 156 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 Q71RC1 249 aaPredicted RBP7.94□□□□□ -1.14
COL4A6-208ENST00000538570 IGLL5B9A064 214 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 EGR2P11161 476 aaPredicted RBP7.94□□□□□ -1.14
COL4A6-208ENST00000538570 CFPP27918 469 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 ZNF726P1Q15940 193 aa7.94□□□□□ -1.14
COL4A6-208ENST00000538570 F6UB75 175 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 NDUFA4O00483 81 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 IGHV1-69DA0A0B4J2H0 117 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 IGHV1-69P01742 117 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 Q6ZUT4 128 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 RMI2Q96E14 147 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 MRPL35Q9NZE8 188 aaKnown RBP7.93□□□□□ -1.14
COL4A6-208ENST00000538570 CENPVL3A0A0U1RRI6 287 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 LMO1P25800 156 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 Q6ZS92 163 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 RTTNQ86VV8 2226 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 F8VRH5 84 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 APOC4P55056 127 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 Q8TCH9 128 aa7.93□□□□□ -1.14
COL4A6-208ENST00000538570 FAM236DA0A1B0GTK5 79 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 FAM236CP0DP71 79 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 CXCL5P42830 114 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 C10orf105Q8TEF2 133 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 SEC61GP60059 68 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 TEN1Q86WV5 123 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 SMIM2Q9BVW6 85 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 RNF223E7ERA6 249 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 G3V318 75 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 VPREB1P12018 145 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 ACACAQ13085 2346 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 DKK2Q9UBU2 259 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 DOCK11Q5JSL3 2073 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 J3QQQ9 107 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 UQCRQO14949 82 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 TEX36Q5VZQ5 186 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 C8orf31Q8N9H6 132 aa7.92□□□□□ -1.14
COL4A6-208ENST00000538570 ATP5G1P05496 136 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 CGB3P0DN86 165 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 DOCK6Q96HP0 2047 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 TRPM7Q96QT4 1865 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 ZNF134P52741 427 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 C20orf78Q9BR46 151 aa7.91□□□□□ -1.14
COL4A6-208ENST00000538570 C17orf58Q2M2W7 97 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 NDUFS7O75251 213 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 GATA4P43694 442 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 ATP6V0E2Q8NHE4 81 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 TDRG1Q3Y452 100 aa7.9□□□□□ -1.14
COL4A6-208ENST00000538570 BAALC-AS2P0C853 105 aa7.9□□□□□ -1.15
COL4A6-208ENST00000538570 CRYGBP07316 175 aa7.9□□□□□ -1.15
COL4A6-208ENST00000538570 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
COL4A6-208ENST00000538570 CFC1P0CG37 223 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms