RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TRPM6Q9BX84 2022 aa3.53□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHD7Q9P2D1 2997 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGLV3-12A0A075B6K2 115 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV19A0A075B6N1 114 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRGV5A0A0B4J1U4 118 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV7-6A0A0J9YX20 115 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 KNCNA6PVL3 124 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 H3BT86 120 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 K7ERJ3 54 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 LGALS9O00182 355 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGF1P05019 195 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 COL8A2P25067 703 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 HBBP68871 147 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 SRSF9Q13242 221 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 SLC48A1Q6P1K1 146 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 Q6ZQT7 251 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 RPP25LQ8N5L8 163 aaKnown RBP3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 NFAM1Q8NET5 270 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 NUP37Q8NFH4 326 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 ZNF414Q96IQ9 312 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 C18orf15Q96N68 181 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 HIST1H4GQ99525 98 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRGV9Q99603 122 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TTTY10Q9BZA0 68 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 PLEKHA3Q9HB20 300 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 FAM60AQ9NP50 221 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 STARD5Q9NSY2 213 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TAS2R4Q9NYW5 299 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 RPUSD1Q9UJJ7 312 aaKnown RBP3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 MOB4Q9Y3A3 225 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 NUMA1Q14980 2115 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 BRWD1Q9NSI6 2320 aa3.52□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV25-1A0A075B6N4 114 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 LOC107984156A0A0G2JMH3 177 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGHV5-10-1A0A0J9YXX1 117 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 UBE2L5PA0A1B0GUS4 154 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 NCBP2LA6PVI3 153 aaKnown RBP3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 H3BVH4 76 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 K7EM74 188 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 M0R1B8 84 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 SYNGR2O43760 224 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 NPPCP23582 126 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 MFAP2P55001 183 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 PCBD1P61457 104 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 HERVK_113P61574 105 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 QRFPP83859 136 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 RPL18Q07020 188 aaKnown RBP3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 VN1R4Q7Z5H5 301 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 ARL17AQ8IVW1 177 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 LINC00311Q8N616 119 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 C3orf56Q8N813 242 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 FAM19A4Q96LR4 140 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 SRXN1Q9BYN0 137 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 LIME1Q9H400 295 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 TMEM167BQ9NRX6 74 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 Q9UF83 564 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 U3KQA8 63 aa3.51□□□□□ -1.85
HMGB3P13-201ENST00000511263 PLXNA2O75051 1894 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 TNRC18O15417 2968 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 A0A1B0GXF2 115 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 hADV29S1A0JD25 119 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 SRSF10O75494 262 aaKnown RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 TCL1BO95988 128 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 NCBP2P52298 156 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 GFERP55789 205 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 ERVK-16P61578 105 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 HIST1H4AP62805 103 aaKnown RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 IGLV3-21P80748 117 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 ATXN8Q156A1 80 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 ZNF56Q15929 161 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 LINC01590Q5TEZ4 76 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 MAPK1IP1LQ8NDC0 245 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 PATE1Q8WXA2 126 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 DSCR8Q96T75 97 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 PSENENQ9NZ42 101 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 AMMECR1Q9Y4X0 333 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 R4GMQ9 66 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 EXPH5Q8NEV8 1989 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 LAMA3Q16787 3333 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 SPTBN5Q9NRC6 3674 aaKnown RBP3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 DOCK9Q9BZ29 2069 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 COL4A2P08572 1712 aa3.5□□□□□ -1.85
HMGB3P13-201ENST00000511263 HCFC1P51610 2035 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 FANCMQ8IYD8 2048 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 KIAA1549LQ6ZVL6 1849 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 MUC22E2RYF6 1773 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 TRBV10-2A0A0K0K1G8 114 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 PLAC8L1A1L4L8 177 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 SCRG1O75711 98 aa3.49□□□□□ -1.85
HMGB3P13-201ENST00000511263 EPPINO95925 133 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms