RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SLC50A1Q9BRV3 221 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 SEC11CQ9BY50 192 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 DPY30Q9C005 99 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 AGPAT4-IT1Q9H0P7 198 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 DNAJC15Q9Y5T4 150 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 CITO14578 2027 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 MYH11P35749 1972 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 GREB1Q4ZG55 1949 aa1.01□□□□□ -2.25
LMNB1-207ENST00000494185 ARHGEF11O15085 1522 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TRAPPC8Q9Y2L5 1435 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 DENND4CQ5VZ89 1909 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TRAV12-2A0A075B6T6 113 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TRAV1-1A0A0B4J248 108 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 IGHV1-58A0A0C4DH39 117 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TRBV7-6A0A0J9YX20 115 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TCRBV3S1A0A5B6 114 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 OR2T8A6NH00 312 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TMEM262E9PQX1 116 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 K7EP34 96 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 M0R2P5 195 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 GEMIN2O14893 280 aaKnown RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 RER1O15258 196 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TIMM17BO60830 172 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 NDUFB6O95139 128 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TCRAP04437 139 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 CXCL1P09341 107 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 ZNF705BP0CI00 300 aaPredicted RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 ARL14EPLP0DKL9 152 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 PYYP10082 97 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 MGST1P10620 155 aaKnown RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 FABP4P15090 132 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 ADCYAP1P18509 176 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TMBIM6P55061 237 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TPPP2P59282 170 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 ROMO1P60602 79 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 Q0VG73 95 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 KLRD1Q13241 179 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 PDE6HQ13956 83 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 IQCJQ1A5X6 159 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 VMA21Q3ZAQ7 101 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 IZUMO2Q6UXV1 221 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 HEPN1Q6WQI6 88 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TMEM91Q6ZNR0 172 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 LINC00305Q7Z4B0 112 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 TEN1Q86WV5 123 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 Q8IYB0 196 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 C10orf111Q8N326 155 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 LINC00301Q8NCQ3 95 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 OR5D16Q8NGK9 328 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 OR5AK2Q8NH90 309 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 OTOSQ8NHW6 89 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 ZNF431Q8TF32 576 aaPredicted RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 BRK1Q8WUW1 75 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 PSMF1Q92530 271 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 AP1S3Q96PC3 154 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 MCEEQ96PE7 176 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 S100A13Q99584 98 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 VAMP8Q9BV40 100 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 CHCHD2Q9Y6H1 151 aaPredicted RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 LY96Q9Y6Y9 160 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 CPAMD8Q8IZJ3 1885 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 XIRP1Q702N8 1843 aaKnown RBP1□□□□□ -2.25
LMNB1-207ENST00000494185 CACNA1GO43497 2377 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 ADGBQ8N7X0 1667 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 WDR97A6NE52 1622 aa1□□□□□ -2.25
LMNB1-207ENST00000494185 A2ML1A8K2U0 1454 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 CCDC141Q6ZP82 1450 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 CEP164Q9UPV0 1460 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 CLIP1P30622 1438 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 NSD3Q9BZ95 1437 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 FOCADQ5VW36 1801 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 ECM29Q5VYK3 1845 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 NALCNQ8IZF0 1738 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 TRAV13-1A0A0B4J241 112 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 TRAV12-1A0A0B4J245 112 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 TRBV27A0A0K0K1C4 114 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 BBIP1A8MTZ0 92 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 C17orf112F2Z3M2 114 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 OR1I1O60431 355 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 ASAH2BP0C7U1 165 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 SLC25A6P12236 298 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 HLA-DRB4P13762 266 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 SDC2P34741 201 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 GUCA1AP43080 201 aaPredicted RBP0.99□□□□□ -2.25
LMNB1-207ENST00000494185 KRTAP13-4Q3LI77 160 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 Q56UQ5 140 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 SPRNQ5BIV9 151 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 MRPL54Q6P161 138 aaKnown RBP0.99□□□□□ -2.25
LMNB1-207ENST00000494185 Q6ZRN7 208 aaPredicted RBP0.99□□□□□ -2.25
LMNB1-207ENST00000494185 Q6ZS92 163 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 ARPINQ7Z6K5 226 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 OR4B1Q8NGF8 309 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 OR10AC1Q8NH08 325 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 ZNF714Q96N38 554 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 AMELYQ99218 206 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 C20orf78Q9BR46 151 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 DPH3P1Q9H4G8 78 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 CCDC167Q9P0B6 97 aa0.99□□□□□ -2.25
LMNB1-207ENST00000494185 LSM2Q9Y333 95 aaKnown RBP0.99□□□□□ -2.25
LMNB1-207ENST00000494185 AP4S1Q9Y587 144 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms