RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 CCDC168Q8NDH2 2452 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 BMI1P35226 326 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 C8orf86Q6ZUL3 223 aa12.08□□□□□ -0.48
BRD9-208ENST00000489816 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
BRD9-208ENST00000489816 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
BRD9-208ENST00000489816 NAV2Q8IVL1 2488 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 MAPK1IP1LQ8NDC0 245 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 METTL26Q96S19 204 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 F6UB75 175 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 ANKRD39Q53RE8 183 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 EEF1AKMT3Q96AZ1 226 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
BRD9-208ENST00000489816 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 CCL25O15444 150 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 Q6AWC8 147 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 PET117Q6UWS5 81 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 TRAV8-2A0A0B4J237 113 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 SMAD7O15105 426 aaKnown RBP12.06□□□□□ -0.48
BRD9-208ENST00000489816 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 ST20Q9HBF5 79 aa12.06□□□□□ -0.48
BRD9-208ENST00000489816 H3BUX3 64 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 PF4V1P10720 104 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 EDN2P20800 178 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 TMEM78Q5T7P6 136 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
BRD9-208ENST00000489816 TTTY13Q9BZ97 58 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 VAMP3Q15836 100 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 PIFOQ8TCI5 191 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
BRD9-208ENST00000489816 PAX8Q06710 450 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 LINC01545Q5VT33 79 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 ATP5J2P56134 94 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 SCRT2Q9NQ03 307 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 AGRNO00468 2067 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 ARL3P36405 182 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 NMUP48645 174 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 ZNF738Q8NE65 137 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 C20orf173Q96LM9 149 aa12.04□□□□□ -0.48
BRD9-208ENST00000489816 FBN2P35556 2912 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 PRR9Q5T870 116 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 MRPL52Q86TS9 123 aaKnown RBP12.03□□□□□ -0.48
BRD9-208ENST00000489816 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 H3BVH4 76 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 LEPP41159 167 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
BRD9-208ENST00000489816 A0A1B0GW15 77 aa12.02□□□□□ -0.48
BRD9-208ENST00000489816 WNK1Q9H4A3 2382 aa12.02□□□□□ -0.48
BRD9-208ENST00000489816 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 IGHV1-69P01742 117 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 HBDP02042 147 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 CCL19Q99731 98 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 M0R381 172 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 TNFRSF6BO95407 300 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 BVES-AS1Q5T3Y7 98 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 IFI27L1Q96BM0 104 aa12.02□□□□□ -0.49
BRD9-208ENST00000489816 PRSS1P07477 247 aa12.01□□□□□ -0.49
BRD9-208ENST00000489816 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
BRD9-208ENST00000489816 PCP2Q8IVA1 136 aa12.01□□□□□ -0.49
BRD9-208ENST00000489816 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
BRD9-208ENST00000489816 AVPP01185 164 aa12.01□□□□□ -0.49
BRD9-208ENST00000489816 HIF1ANQ9NWT6 349 aa12□□□□□ -0.49
BRD9-208ENST00000489816 NF1P21359 2839 aa12□□□□□ -0.49
BRD9-208ENST00000489816 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
BRD9-208ENST00000489816 C10orf99Q6UWK7 81 aa12□□□□□ -0.49
BRD9-208ENST00000489816 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
BRD9-208ENST00000489816 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
BRD9-208ENST00000489816 GAGE1Q13065 139 aa11.99□□□□□ -0.49
BRD9-208ENST00000489816 PRORYQ9H606 182 aa11.99□□□□□ -0.49
BRD9-208ENST00000489816 U3KQK5 164 aa11.99□□□□□ -0.49
BRD9-208ENST00000489816 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
BRD9-208ENST00000489816 HIST1H1AQ02539 215 aaPredicted RBP11.99□□□□□ -0.49
BRD9-208ENST00000489816 SLC50A1Q9BRV3 221 aa11.99□□□□□ -0.49
BRD9-208ENST00000489816 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 K7EMI3 77 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 C2orf91Q6ZV80 131 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 TMEM158Q8WZ71 300 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 C7orf71A4D174 169 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 IGKV3-20P01619 116 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
BRD9-208ENST00000489816 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
BRD9-208ENST00000489816 COX8AP10176 69 aa11.97□□□□□ -0.49
BRD9-208ENST00000489816 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
BRD9-208ENST00000489816 CLEC2AQ6UVW9 174 aa11.97□□□□□ -0.49
BRD9-208ENST00000489816 RAB37Q96AX2 223 aa11.97□□□□□ -0.49
BRD9-208ENST00000489816 K7EP13 123 aa11.96□□□□□ -0.49
BRD9-208ENST00000489816 PRB1P04280 392 aa11.96□□□□□ -0.49
BRD9-208ENST00000489816 S100A4P26447 101 aaKnown RBP11.96□□□□□ -0.49
BRD9-208ENST00000489816 RNASE4P34096 147 aaKnown RBP11.96□□□□□ -0.49
BRD9-208ENST00000489816 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms