RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 SRSF2Q01130 221 aaKnown RBP9.92□□□□□ -0.82
SEC13-216ENST00000479868 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 C20orf144Q9BQM9 153 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 NPFFR1Q9GZQ6 430 aa9.92□□□□□ -0.82
SEC13-216ENST00000479868 DOPEY2Q9Y3R5 2298 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 A0A0G2JLM5 398 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 CIDEAO60543 219 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 LOXL1Q08397 574 aaPredicted RBP9.91□□□□□ -0.82
SEC13-216ENST00000479868 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 C10orf99Q6UWK7 81 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 CREBBPQ92793 2442 aa9.91□□□□□ -0.82
SEC13-216ENST00000479868 FAM104BQ5XKR9 115 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 C9orf139Q6ZV77 190 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 APCP25054 2843 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 ZNF469Q96JG9 3925 aaPredicted RBP9.9□□□□□ -0.82
SEC13-216ENST00000479868 D6R8Y8 96 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 SOCS3O14543 225 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 IGHV4-31P0DP07 118 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 TWIST1Q15672 202 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 Q6ZQT7 251 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 ATOH7Q8N100 152 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 MSRB1Q9NZV6 116 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 SELENOKQ9Y6D0 94 aa9.9□□□□□ -0.82
SEC13-216ENST00000479868 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 PSMB8P28062 276 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 ZNF738Q8NE65 137 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 EDN2P20800 178 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 C2orf88Q9BSF0 95 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 ZNF580Q9UK33 172 aa9.89□□□□□ -0.83
SEC13-216ENST00000479868 DEFB1P60022 68 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 RPL11P62913 178 aaKnown RBP9.88□□□□□ -0.83
SEC13-216ENST00000479868 FOXE3Q13461 319 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 DEFB113Q30KQ7 82 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 MRPL51Q4U2R6 128 aaKnown RBP9.88□□□□□ -0.83
SEC13-216ENST00000479868 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 U3KQK5 164 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 IGKV3-7A0A075B6H7 116 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 IGHV7-4-1A0A0J9YVY3 117 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 HSBP1L1C9JCN9 74 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 EREGO14944 169 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 LEPROTL1O95214 131 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 FSHBP01225 129 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 HIST1H1AQ02539 215 aaPredicted RBP9.88□□□□□ -0.83
SEC13-216ENST00000479868 SPATA45Q537H7 98 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 Q5PR19 223 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 PRR9Q5T870 116 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 MIEN1Q9BRT3 115 aa9.88□□□□□ -0.83
SEC13-216ENST00000479868 DAZ1Q9NQZ3 744 aaKnown RBP9.88□□□□□ -0.83
SEC13-216ENST00000479868 PEF1Q9UBV8 284 aaKnown RBP9.88□□□□□ -0.83
SEC13-216ENST00000479868 ZNF705AQ6ZN79 300 aaPredicted RBP9.87□□□□□ -0.83
SEC13-216ENST00000479868 PRELID3AQ96N28 172 aa9.87□□□□□ -0.83
SEC13-216ENST00000479868 TMEM70Q9BUB7 260 aa9.87□□□□□ -0.83
SEC13-216ENST00000479868 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
SEC13-216ENST00000479868 FAM106AQ4KMX7 169 aa9.87□□□□□ -0.83
SEC13-216ENST00000479868 ORMDL3Q8N138 153 aa9.87□□□□□ -0.83
SEC13-216ENST00000479868 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
SEC13-216ENST00000479868 BEX4Q9NWD9 120 aaPredicted RBP9.87□□□□□ -0.83
SEC13-216ENST00000479868 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
SEC13-216ENST00000479868 SMKR1H3BMG3 65 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 DMRTA1Q5VZB9 504 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 SNHG12Q9BXW3 62 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
SEC13-216ENST00000479868 TENM4Q6N022 2769 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 Q6YL49 198 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 TMEM191AQ9H0A3 160 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 SIGLEC8Q9NYZ4 499 aa9.86□□□□□ -0.83
SEC13-216ENST00000479868 TIMM8BQ9Y5J9 83 aaPredicted RBP9.86□□□□□ -0.83
SEC13-216ENST00000479868 F6UB75 175 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 SYS1-DBNDD2H3BUS1 97 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 NCR2O95944 276 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
SEC13-216ENST00000479868 SRD5A1P18405 259 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 RNF185Q96GF1 192 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 Q96MF0 132 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 OR5AL1P0C617 328 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 CKS2P33552 79 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 TLN2Q9Y4G6 2542 aa9.85□□□□□ -0.83
SEC13-216ENST00000479868 NPYP01303 97 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 PRSS57Q6UWY2 283 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 LRRC75A-AS1Q8N1F1 130 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 ZFAND2AQ8N6M9 145 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 OR10AG1Q8NH19 301 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 LENEPQ9Y5L5 61 aa9.84□□□□□ -0.83
SEC13-216ENST00000479868 OVOL1O14753 267 aa9.83□□□□□ -0.84
SEC13-216ENST00000479868 HOXA3O43365 443 aaPredicted RBP9.83□□□□□ -0.84
SEC13-216ENST00000479868 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
SEC13-216ENST00000479868 KRTAP1-3Q8IUG1 177 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms