RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USMG5Q96IX5 58 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 PRO1933Q9H354 126 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 IGHV3OR16-13A0A075B7E8 117 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 IGHV3-49A0A0A0MS15 119 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.18□□□□□ -1.1
PKP4-206ENST00000452162 IGHV3-74A0A0B4J1X5 117 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 PRAC2D3DTV9 90 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 ZNF324O75467 553 aaPredicted RBP8.18□□□□□ -1.1
PKP4-206ENST00000452162 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 CFHR3Q02985 330 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 ZNF580Q9UK33 172 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
PKP4-206ENST00000452162 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 CIDEAO60543 219 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 ARMS2P0C7Q2 107 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 CD33P20138 364 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 AMTP48728 403 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 Q6AWC8 147 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 RNF182Q8N6D2 247 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 NPFFR1Q9GZQ6 430 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 KLK15Q9H2R5 256 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 LOC102724200A0A096LPH7 203 aaPredicted RBP8.17□□□□□ -1.1
PKP4-206ENST00000452162 RBAKDNA6NC62 111 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 NDUFA4O00483 81 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 TCAPO15273 167 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
PKP4-206ENST00000452162 C12orf54Q6X4T0 127 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 C8orf86Q6ZUL3 223 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 GLMPQ8WWB7 406 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 MRPL53Q96EL3 112 aaKnown RBP8.17□□□□□ -1.1
PKP4-206ENST00000452162 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
PKP4-206ENST00000452162 TMEM189A5PLL7 270 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 RAB4AP20338 218 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 PMCHP20382 165 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 RIGQ13278 110 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 UNQ9165/PRO28630Q6UXU0 137 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 NIT1Q86X76 327 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 SPATA3Q8NHX4 192 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 C16orf95Q9H693 158 aa8.16□□□□□ -1.1
PKP4-206ENST00000452162 A0A1B0GW15 77 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 PF4V1P10720 104 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 DDTP30046 118 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 ERCC8Q13216 396 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 URB1-AS1Q96HZ7 61 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 Q8N976 141 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 C14orf144Q96I85 54 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
PKP4-206ENST00000452162 TMSB15BA0A087X1C1 80 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 IGHV3-11P01762 117 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 BMI1P35226 326 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 LCNL1Q6ZST4 164 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 Q8N2B8 174 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 ZNF705DP0CH99 300 aaPredicted RBP8.14□□□□□ -1.11
PKP4-206ENST00000452162 ZNF705BP0CI00 300 aaPredicted RBP8.14□□□□□ -1.11
PKP4-206ENST00000452162 PROK1P58294 105 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 RPS20P60866 119 aaKnown RBP8.14□□□□□ -1.11
PKP4-206ENST00000452162 LYZL1Q6UWQ5 148 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 C3orf56Q8N813 242 aa8.14□□□□□ -1.11
PKP4-206ENST00000452162 A0A0G2JLM5 398 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 KIR2DL5BA0A0G2JN68 375 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 KIR2DL5BA0A0G2JPC4 375 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 CTRLP40313 264 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 KRTAP10-3P60369 221 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 RNASEKQ6P5S7 137 aaKnown RBP8.13□□□□□ -1.11
PKP4-206ENST00000452162 ZNF493Q6ZR52 646 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 GPHB5Q86YW7 130 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 KIR2DL5AQ8N109 375 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 AGPAT4-IT1Q9H0P7 198 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 HSBP1O75506 76 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 IGLC6P0CF74 106 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 NTF3P20783 257 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 KRTDAPP60985 99 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 CLEC5AQ9NY25 188 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
PKP4-206ENST00000452162 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 M0QZ24 198 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 SOCS3O14543 225 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 C3orf79P0CE67 100 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 PSMB8P28062 276 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 ZNF138P52744 262 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 HIST2H2BDQ6DRA6 164 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
PKP4-206ENST00000452162 CHCHD1Q96BP2 118 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms