RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 IZUMO2Q6UXV1 221 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 C3orf62Q6ZUJ4 267 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 SSBP3-AS1Q7Z2R9 100 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TRAPPC5Q8IUR0 188 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TCTEX1D1Q8N7M0 179 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 GNPDA2Q8TDQ7 276 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CLEC2BQ92478 149 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CCDC42Q96M95 316 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 GPX7Q96SL4 187 aaPredicted RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 SIGMAR1Q99720 223 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CNFNQ9BYD5 112 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 MAP1LC3BQ9GZQ8 125 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CYP4F30PQ9H0H9 118 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 PARVBQ9HBI1 364 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 FKBP11Q9NYL4 201 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 PRO0255Q9UI72 69 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TPRKBQ9Y3C4 175 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 PKDREJQ9NTG1 2253 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 CD109Q6YHK3 1445 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CDK13Q14004 1512 aaKnown RBP-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 PLXNA1Q9UIW2 1896 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 SPAG17Q6Q759 2223 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 NBPF19A0A087WUL8 3843 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 TMEM30CPA0ZSE6 113 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 BBIP1A8MTZ0 92 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 IFNA4P05014 189 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CCKP06307 115 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 PYYP10082 97 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 BCL2P10415 239 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 FABP4P15090 132 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 SPRR1AP35321 89 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CAPZBP47756 277 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 MYL6P60660 151 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 NCALDP61601 193 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 HIST1H3AP68431 136 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 HBBP68871 147 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 TMEM97Q5BJF2 176 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 FAM74A4Q5TZK3 123 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 Q5XG85 94 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 OR5A2Q8NGI9 324 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CCL4L1Q8NHW4 92 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CARD19Q96LW7 228 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 CIB3Q96Q77 187 aaPredicted RBP-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 BPESC1Q9GZL8 116 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 NKIRAS1Q9NYS0 192 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 FAM32AQ9Y421 112 aaKnown RBP-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 SPTBN2O15020 2390 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 RIF1Q5UIP0 2472 aaKnown RBP-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 UBR2Q8IWV8 1755 aa-0.62□□□□□ -2.51
SNHG3-203ENST00000447507 LRP5O75197 1615 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 WNK1Q9H4A3 2382 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 NBEAL1Q6ZS30 2694 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 M0QX08 132 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 CETN3O15182 167 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 SERPINA1P01009 418 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 TPM3P06753 285 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 GNG5P63218 68 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 HAMPP81172 84 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 RBM3P98179 157 aaKnown RBP-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 KRTAP6-2Q3LI66 62 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 Q5VSD8 79 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 IFT20Q8IY31 132 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 TMEM229BQ8NBD8 167 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 OR8J2Q8NGG1 315 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 OR10X1Q8NGY0 326 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 OR5AK2Q8NH90 309 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 SMIM11BQ8TCY0 68 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 DMAC1Q96GE9 116 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 TMEM141Q96I45 108 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 PAIP2Q9BPZ3 127 aaKnown RBP-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 OR2J1Q9GZK6 312 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 RTL9Q8NET4 1388 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 PCF11O94913 1555 aaKnown RBP-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 DNAH6Q9C0G6 4158 aa-0.63□□□□□ -2.51
SNHG3-203ENST00000447507 FLNBO75369 2602 aaKnown RBP-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 NF1P21359 2839 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 PIK3C2AO00443 1686 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 ARL5CA6NH57 179 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 TMEM114B3SHH9 223 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 EDF1O60869 148 aaKnown RBP-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 TRACP01848 142 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 TPM4P67936 248 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 AKIRIN2Q53H80 203 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 FKBP1CQ5VVH2 108 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 C1orf140Q5VVS0 124 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 Q6ZRX8 168 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 PHF5AQ7RTV0 110 aaKnown RBP-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 Q8IZM0 81 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 DIRC1Q969H9 104 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 ATG5Q9H1Y0 275 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 OTORQ9NRC9 128 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 SS18L2Q9UHA2 77 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 COL6A5A8TX70 2615 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 CSPG4Q6UVK1 2322 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 KIAA1107Q9UPP5 1409 aa-0.64□□□□□ -2.51
SNHG3-203ENST00000447507 MYH9P35579 1960 aaKnown RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms