RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 TEP1Q99973 2627 aaKnown RBP2.43□□□□□ -2.02
CEP290-202ENST00000397838 A0A1B0GV90 55 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 LOC107986453A0A1B0GWG9 222 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 SAA1P0DJI8 122 aaPredicted RBP2.43□□□□□ -2.02
CEP290-202ENST00000397838 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 TEN1Q86WV5 123 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 OR5AS1Q8N127 324 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 LINC00052Q96N35 136 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 COL6A5A8TX70 2615 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 KDM5CP41229 1560 aa2.43□□□□□ -2.02
CEP290-202ENST00000397838 HYPMO75409 117 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 TSPAN19P0C672 248 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 DNAJB13P59910 316 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 C2orf82Q6UX34 121 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 ERCC6Q03468 1493 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 SORL1Q92673 2214 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 EXPH5Q8NEV8 1989 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 MED13Q9UHV7 2174 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 A6NN06 94 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 F8W1H4 67 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 K7EP13 123 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 GNG7O60262 68 aa2.42□□□□□ -2.02
CEP290-202ENST00000397838 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 ZNF563Q8TA94 476 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 RB1CC1Q8TDY2 1594 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 OVOS2A0A0J9YW53 1432 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 OVOS2Q6IE36 1432 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 NPFFO15130 113 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 PRB4P10163 310 aaPredicted RBP2.41□□□□□ -2.02
CEP290-202ENST00000397838 CKS2P33552 79 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 RPS19BP1Q86WX3 136 aaKnown RBP2.41□□□□□ -2.02
CEP290-202ENST00000397838 KLK9Q9UKQ9 250 aa2.41□□□□□ -2.02
CEP290-202ENST00000397838 MRC2Q9UBG0 1479 aa2.4□□□□□ -2.02
CEP290-202ENST00000397838 CEP162Q5TB80 1403 aa2.4□□□□□ -2.02
CEP290-202ENST00000397838 MAST4O15021 2626 aa2.4□□□□□ -2.02
CEP290-202ENST00000397838 C10orf111Q8N326 155 aa2.4□□□□□ -2.02
CEP290-202ENST00000397838 CHD3Q12873 2000 aaKnown RBP2.4□□□□□ -2.03
CEP290-202ENST00000397838 MYH1P12882 1939 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 PRG4Q92954 1404 aaPredicted RBP2.4□□□□□ -2.03
CEP290-202ENST00000397838 LAMB2P55268 1798 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 CASZ1Q86V15 1759 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 PVALEFA0A1B0GWK0 134 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 MIF4GDA9UHW6 222 aaKnown RBP2.4□□□□□ -2.03
CEP290-202ENST00000397838 HCRTO43612 131 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 HIST1H1BP16401 226 aaKnown RBP2.4□□□□□ -2.03
CEP290-202ENST00000397838 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
CEP290-202ENST00000397838 MYLKQ15746 1914 aa2.4□□□□□ -2.03
CEP290-202ENST00000397838 TOP2BQ02880 1626 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 CDC42EP2O14613 210 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 GLIPR1L1Q6UWM5 242 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 METTL1Q9UBP6 276 aaKnown RBP2.39□□□□□ -2.03
CEP290-202ENST00000397838 VIRMAQ69YN4 1812 aaKnown RBP2.39□□□□□ -2.03
CEP290-202ENST00000397838 DISP2A7MBM2 1401 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 ZNF670-ZNF695F2Z2N8 137 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
CEP290-202ENST00000397838 KLF7O75840 302 aaPredicted RBP2.39□□□□□ -2.03
CEP290-202ENST00000397838 NCS1P62166 190 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 WHAMMP3Q1A5X7 153 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 CASC2Q6XLA1 102 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 TNRC6AQ8NDV7 1962 aaKnown RBP2.39□□□□□ -2.03
CEP290-202ENST00000397838 PTPRFP10586 1907 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 CLIP1P30622 1438 aa2.39□□□□□ -2.03
CEP290-202ENST00000397838 J3QR89 54 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 CCL25O15444 150 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 DNAL4O96015 105 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 RRAS2P62070 204 aaPredicted RBP2.38□□□□□ -2.03
CEP290-202ENST00000397838 C5orf17Q8NAS9 161 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 FGD6Q6ZV73 1430 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 RIMS1Q86UR5 1692 aaKnown RBP2.38□□□□□ -2.03
CEP290-202ENST00000397838 POLA1P09884 1462 aaPredicted RBP2.38□□□□□ -2.03
CEP290-202ENST00000397838 GAPVD1Q14C86 1478 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 PITX3O75364 302 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 COPZ1P61923 177 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 FAM74A1Q5RGS3 127 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 MPC1Q9Y5U8 109 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 TNS3Q68CZ2 1445 aa2.38□□□□□ -2.03
CEP290-202ENST00000397838 ZNF518AQ6AHZ1 1483 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 TRBV6-4A0A1B0GX49 114 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 SLC35B3Q9H1N7 401 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 ANKRD36BQ8N2N9 1353 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 HELZP42694 1942 aaKnown RBP2.37□□□□□ -2.03
CEP290-202ENST00000397838 F8W036 122 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 MRPS14O60783 128 aaKnown RBP2.37□□□□□ -2.03
CEP290-202ENST00000397838 ZNF25P17030 456 aaPredicted RBP2.37□□□□□ -2.03
CEP290-202ENST00000397838 IDO2Q6ZQW0 420 aa2.37□□□□□ -2.03
CEP290-202ENST00000397838 THOC2Q8NI27 1593 aaKnown RBP2.36□□□□□ -2.03
CEP290-202ENST00000397838 BAZ1AQ9NRL2 1556 aaPredicted RBP2.36□□□□□ -2.03
CEP290-202ENST00000397838 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
CEP290-202ENST00000397838 MMGT1Q8N4V1 131 aa2.36□□□□□ -2.03
CEP290-202ENST00000397838 USP54Q70EL1 1684 aa2.36□□□□□ -2.03
CEP290-202ENST00000397838 CPSF1Q10570 1443 aaKnown RBP2.36□□□□□ -2.03
CEP290-202ENST00000397838 COX7CP15954 63 aa2.36□□□□□ -2.03
CEP290-202ENST00000397838 SDF2Q99470 211 aa2.36□□□□□ -2.03
CEP290-202ENST00000397838 TRPM7Q96QT4 1865 aa2.35□□□□□ -2.03
CEP290-202ENST00000397838 NOTCH1P46531 2555 aa2.35□□□□□ -2.03
CEP290-202ENST00000397838 RPL13AP3Q6NVV1 102 aa2.35□□□□□ -2.03
CEP290-202ENST00000397838 OBSCN-AS1Q96MR7 158 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms