RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 ZNF738Q8NE65 137 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 PRSS3P2Q8NHM4 247 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 CUBNO60494 3623 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 IGKV3D-20A0A0C4DH25 116 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 MRPL51Q4U2R6 128 aaKnown RBP12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
CNKSR1-202ENST00000374253 F6UB75 175 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 SPRY2O43597 315 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 PRR9Q5T870 116 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 ZNF493Q6ZR52 646 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
CNKSR1-202ENST00000374253 M0R143 59 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 C2orf88Q9BSF0 95 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 NPFFR1Q9GZQ6 430 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 SORL1Q92673 2214 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 A0A096LNT2 108 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 A0A1B0GW15 77 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 NDUFA4O00483 81 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 FA2HQ7L5A8 372 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 TENM4Q6N022 2769 aa12.17□□□□□ -0.46
CNKSR1-202ENST00000374253 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 M0QZK8 103 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 SLC25A16P16260 332 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 RAB4AP20338 218 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 CHD6Q8TD26 2715 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 CKS2P33552 79 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 PRSS57Q6UWY2 283 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 USMG5Q96IX5 58 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
CNKSR1-202ENST00000374253 OR4C46A6NHA9 309 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 NPYP01303 97 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 IGLC3P0DOY3 106 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 IGLL1P15814 213 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 DSCR9P59020 149 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 RPS20P60866 119 aaKnown RBP12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 ORMDL3Q8N138 153 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 KIR3DS1Q14943 382 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 Q6ZN92 141 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 OR10AG1Q8NH19 301 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
CNKSR1-202ENST00000374253 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.47
CNKSR1-202ENST00000374253 EVI2AP22794 236 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 LINC01559Q495D7 138 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 WFDC3Q8IUB2 231 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 WFDC12Q8WWY7 111 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 NF1P21359 2839 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 OR5AL1P0C617 328 aa12.14□□□□□ -0.47
CNKSR1-202ENST00000374253 CFHR3Q02985 330 aa12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 C9orf47Q6ZRZ4 202 aa12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 TRAV9-2A0A087WT02 112 aa12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 C9orf139Q6ZV77 190 aa12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
CNKSR1-202ENST00000374253 A0A096LNJ9 63 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 GATA3P23771 443 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 RNF185Q96GF1 192 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 CR1P17927 2039 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 H3BUA1 57 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 TFPI2P48307 235 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 UQCR10Q9UDW1 63 aa12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
CNKSR1-202ENST00000374253 IGHV7-4-1A0A0J9YVY3 117 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 H3BVH4 76 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 SOCS3O14543 225 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 UFC1Q9Y3C8 167 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 U3KQK5 164 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 MRPL53Q96EL3 112 aaKnown RBP12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
CNKSR1-202ENST00000374253 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 TCTAP57738 103 aa12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 LBHQ53QV2 105 aaPredicted RBP12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 HIST2H2BDQ6DRA6 164 aa12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 PSMB8P28062 276 aa12.1□□□□□ -0.47
CNKSR1-202ENST00000374253 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms