RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SCRT2Q9NQ03 307 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 ADGRG4Q8IZF6 3080 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 TRGV9Q99603 122 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 CCL19Q99731 98 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 ZNF462Q96JM2 2506 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 A0A1B0GW15 77 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 FABP5P3A8MUU1 101 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 PPBPP02775 128 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 FXYD2P54710 66 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 EEF1AKMT3Q96AZ1 226 aa12.09□□□□□ -0.47
VARS2-201ENST00000321897 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 K7ENP7 123 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 IGFL2Q6UWQ7 119 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 ZNF503Q96F45 646 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 RNASE4P34096 147 aaKnown RBP12.08□□□□□ -0.48
VARS2-201ENST00000321897 TEX36Q5VZQ5 186 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 VGLL1Q99990 258 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 NPFFR1Q9GZQ6 430 aa12.08□□□□□ -0.48
VARS2-201ENST00000321897 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
VARS2-201ENST00000321897 FAM106AQ4KMX7 169 aa12.07□□□□□ -0.48
VARS2-201ENST00000321897 MRPL51Q4U2R6 128 aaKnown RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 NEU4Q8WWR8 484 aaPredicted RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 CPAMD8Q8IZJ3 1885 aa12.07□□□□□ -0.48
VARS2-201ENST00000321897 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 TNFRSF14Q92956 283 aa12.07□□□□□ -0.48
VARS2-201ENST00000321897 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
VARS2-201ENST00000321897 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
VARS2-201ENST00000321897 ZNF256Q9Y2P7 627 aaPredicted RBP12.07□□□□□ -0.48
VARS2-201ENST00000321897 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
VARS2-201ENST00000321897 NPIPB6E9PJ23 425 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 NCOR1P1Q9H4R4 102 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 A8MWV9 139 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 EFNA4P52798 201 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 FAM104BQ5XKR9 115 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 PVRIGQ6DKI7 326 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 MRPL35Q9NZE8 188 aaKnown RBP12.06□□□□□ -0.48
VARS2-201ENST00000321897 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 H3BUX3 64 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 PAX1P15863 534 aa12.06□□□□□ -0.48
VARS2-201ENST00000321897 DOPEY1Q5JWR5 2465 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
VARS2-201ENST00000321897 ATMQ13315 3056 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 ATP6V0E1O15342 81 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 DGAT2L7PQ6IED9 249 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 P0C879 139 aa12.05□□□□□ -0.48
VARS2-201ENST00000321897 PSMB11A5LHX3 300 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 TNFRSF6BO95407 300 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 LTAP01374 205 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 PIMREGQ9BSJ6 248 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 DMXL2Q8TDJ6 3036 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 NPC2P61916 151 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 Q8N976 141 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 GAGE2BQ13066 116 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
VARS2-201ENST00000321897 ATG2AQ2TAZ0 1938 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 A0A1W2PRX2 142 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 TMEM95Q3KNT9 176 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 Q8NA96 180 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 WIPF2Q8TF74 440 aaPredicted RBP12.03□□□□□ -0.48
VARS2-201ENST00000321897 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 SS18L2Q9UHA2 77 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
VARS2-201ENST00000321897 DLX4Q92988 240 aaPredicted RBP12.03□□□□□ -0.48
VARS2-201ENST00000321897 DEFB1P60022 68 aa12.02□□□□□ -0.48
VARS2-201ENST00000321897 ZNF56Q15929 161 aa12.02□□□□□ -0.48
VARS2-201ENST00000321897 LGALS9BQ3B8N2 356 aa12.02□□□□□ -0.48
VARS2-201ENST00000321897 LGALS9CQ6DKI2 356 aa12.02□□□□□ -0.48
VARS2-201ENST00000321897 ZFAND6Q6FIF0 208 aa12.02□□□□□ -0.48
VARS2-201ENST00000321897 ZNF492Q9P255 531 aa12.02□□□□□ -0.49
VARS2-201ENST00000321897 G3V4G9 280 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 TSPAN13O95857 204 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 ZNF688P0C7X2 276 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 FNDC10F2Z333 226 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.492e-10■□□□□ 10.3
VARS2-201ENST00000321897 LAGE3Q14657 143 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 SHANK2-AS3Q9BTD1 123 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 COX6CP09669 75 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 POU2AF1Q16633 256 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 FAM159AQ6UWV7 190 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 NRGNQ92686 78 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 GFRA4Q9GZZ7 299 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 IGKV1-17P01599 117 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 KIR2DL4Q99706 377 aa12.01□□□□□ -0.49
VARS2-201ENST00000321897 TRBV19A0A075B6N1 114 aa12□□□□□ -0.49
VARS2-201ENST00000321897 CT83Q5H943 113 aa12□□□□□ -0.49
VARS2-201ENST00000321897 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms