RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 TWIST1Q15672 202 aa12.51□□□□□ -0.41
CRAT-201ENST00000318080 PHLDA1Q8WV24 401 aaPredicted RBP12.51□□□□□ -0.41
CRAT-201ENST00000318080 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
CRAT-201ENST00000318080 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
CRAT-201ENST00000318080 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
CRAT-201ENST00000318080 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
CRAT-201ENST00000318080 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 PAX8Q06710 450 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
CRAT-201ENST00000318080 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 DYNLRB1Q9NP97 96 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 CLEC3BP05452 202 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 LEPP41159 167 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 ADORA2A-AS1P86434 159 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 ZNF562Q6V9R5 426 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
CRAT-201ENST00000318080 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 E7EQL1 145 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 SH2D1AO60880 128 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 RNF183Q96D59 192 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 FOXC2Q99958 501 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 C20orf78Q9BR46 151 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
CRAT-201ENST00000318080 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 TMEM189A5PLL7 270 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
CRAT-201ENST00000318080 ZC2HC1BQ5TFG8 222 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 RPEQ96AT9 228 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 NPIPB5A8MRT5 1133 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 IGLL5B9A064 214 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 HLA-DMBP28068 263 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 ZNF575Q86XF7 245 aa12.48□□□□□ -0.41
CRAT-201ENST00000318080 TRBV7-9A0A0J9YWB2 115 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 TIMM23O14925 209 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 GNLYP22749 145 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 AKAP6Q13023 2319 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 EGR2P11161 476 aaPredicted RBP12.47□□□□□ -0.41
CRAT-201ENST00000318080 DPF1Q92782 380 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 U3KQK5 164 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 SHISA9B4DS77 424 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 SIVA1O15304 175 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 SPATA25Q9BR10 227 aa12.47□□□□□ -0.41
CRAT-201ENST00000318080 LINC01560Q8TB33 94 aa12.46□□□□□ -0.41
CRAT-201ENST00000318080 LINC01548A6NM66 108 aa12.46□□□□□ -0.42
CRAT-201ENST00000318080 CEND1Q8N111 149 aa12.46□□□□□ -0.42
CRAT-201ENST00000318080 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
CRAT-201ENST00000318080 A0A1B0GW15 77 aa12.45□□□□□ -0.42
CRAT-201ENST00000318080 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
CRAT-201ENST00000318080 SRSF8Q9BRL6 282 aaKnown RBP12.45□□□□□ -0.42
CRAT-201ENST00000318080 LY6HO94772 140 aa12.44□□□□□ -0.42
CRAT-201ENST00000318080 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
CRAT-201ENST00000318080 TMEM158Q8WZ71 300 aa12.44□□□□□ -0.42
CRAT-201ENST00000318080 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
CRAT-201ENST00000318080 CENPEQ02224 2701 aa12.44□□□□□ -0.42
CRAT-201ENST00000318080 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 E9PLD3 99 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
CRAT-201ENST00000318080 NDUFA3O95167 84 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 C12orf74Q32Q52 190 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 CITED1Q99966 193 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 ONECUT1Q9UBC0 465 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
CRAT-201ENST00000318080 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 OR11H12B2RN74 326 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 IGKCP01834 107 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 Q6AWC8 147 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 LYPD1Q8N2G4 141 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 OR11H1Q8NG94 326 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 OR11H2Q8NH07 326 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 PTH2Q96A98 100 aa12.43□□□□□ -0.42
CRAT-201ENST00000318080 MRPL35Q9NZE8 188 aaKnown RBP12.43□□□□□ -0.42
CRAT-201ENST00000318080 A0A1B0GWB2 263 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 B5MCH6 92 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 KLRD1Q13241 179 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 DEFB104AQ8WTQ1 72 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 RNF185Q96GF1 192 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 PRR25Q96S07 402 aa12.42□□□□□ -0.42
CRAT-201ENST00000318080 SPRY2O43597 315 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 IGHG4P01861 327 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 ORM1P02763 201 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 TGFAP01135 160 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 EFNA4P52798 201 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 NDPQ00604 133 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 FHL3Q13643 280 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 KLK15Q9H2R5 256 aa12.41□□□□□ -0.42
CRAT-201ENST00000318080 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms