RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ANKRD17O75179 2603 aaKnown RBP8.88□□□□□ -0.99
PTPN2-201ENST00000309660 NPYP01303 97 aa8.88□□□□□ -0.99
PTPN2-201ENST00000309660 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
PTPN2-201ENST00000309660 C18orf15Q96N68 181 aa8.88□□□□□ -0.99
PTPN2-201ENST00000309660 NAV2Q8IVL1 2488 aa8.87□□□□□ -0.99
PTPN2-201ENST00000309660 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
PTPN2-201ENST00000309660 FOXE3Q13461 319 aa8.87□□□□□ -0.99
PTPN2-201ENST00000309660 SMAD7O15105 426 aaKnown RBP8.86□□□□□ -0.99
PTPN2-201ENST00000309660 MSMBP08118 114 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
PTPN2-201ENST00000309660 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
PTPN2-201ENST00000309660 SORL1Q92673 2214 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 EPG5Q9HCE0 2579 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 TRAV8-2A0A0B4J237 113 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 ERASQ7Z444 233 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 TMEM208Q9BTX3 173 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 IGF1P05019 195 aa8.86□□□□□ -0.99
PTPN2-201ENST00000309660 AVPP01185 164 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 ZNF747Q9BV97 191 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 F6UB75 175 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 WFDC12Q8WWY7 111 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
PTPN2-201ENST00000309660 MYO9AB2RTY4 2548 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
PTPN2-201ENST00000309660 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 SPANXN1Q5VSR9 72 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 PET117Q6UWS5 81 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 FAM223BA6NKX1 122 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 NPSP0C0P6 89 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 CACNG7P62955 275 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 HIST1H1AQ02539 215 aaPredicted RBP8.84□□□□□ -0.99
PTPN2-201ENST00000309660 FAM223AQ8IWN6 122 aa8.84□□□□□ -0.99
PTPN2-201ENST00000309660 SONP18583 2426 aaKnown RBP8.84□□□□□ -1
PTPN2-201ENST00000309660 A0A087X0K7 114 aa8.84□□□□□ -1
PTPN2-201ENST00000309660 H3BVH4 76 aa8.84□□□□□ -1
PTPN2-201ENST00000309660 TM4SF20Q53R12 229 aa8.84□□□□□ -1
PTPN2-201ENST00000309660 MPV17L2Q567V2 206 aa8.84□□□□□ -1
PTPN2-201ENST00000309660 SLC25A34Q6PIV7 304 aa8.84□□□□□ -1
PTPN2-201ENST00000309660 CRXO43186 299 aaPredicted RBP8.83□□□□□ -1
PTPN2-201ENST00000309660 C20orf173Q96LM9 149 aa8.83□□□□□ -1
PTPN2-201ENST00000309660 NUDT3O95989 172 aa8.83□□□□□ -1
PTPN2-201ENST00000309660 M0R381 172 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 S100A4P26447 101 aaKnown RBP8.82□□□□□ -1
PTPN2-201ENST00000309660 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 GOLT1BQ9Y3E0 138 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 CCDC168Q8NDH2 2452 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 A0A096LNJ9 63 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 HBDP02042 147 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 EDN2P20800 178 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 SMIM15Q7Z3B0 74 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 ST20Q9HBF5 79 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 USP24Q9UPU5 2620 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 NDUFS8O00217 210 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 DLEU1O43261 78 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 TGFAP01135 160 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 IGHV4-59P01825 116 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 PRR9Q5T870 116 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 DMRTA1Q5VZB9 504 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 ZNF575Q86XF7 245 aa8.82□□□□□ -1
PTPN2-201ENST00000309660 B4DSR2 109 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 TCF21O43680 179 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 KIR3DS1Q14943 382 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 C10orf99Q6UWK7 81 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 OR10J6PQ8NGY7 276 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 MEGF9Q9H1U4 602 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 TNFRSF6BO95407 300 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 IGHG2P01859 326 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 LINC01559Q495D7 138 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 ARL6IP6Q8N6S5 226 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 RHPN1-AS1Q9BWJ2 59 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 LEPP41159 167 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 MRPL52Q86TS9 123 aaKnown RBP8.81□□□□□ -1
PTPN2-201ENST00000309660 GATD1Q8NB37 220 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 RNF185Q96GF1 192 aa8.81□□□□□ -1
PTPN2-201ENST00000309660 MRPS16Q9Y3D3 137 aaKnown RBP8.81□□□□□ -1
PTPN2-201ENST00000309660 RBAKDNA6NC62 111 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 A6NDX4 124 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 RNASE4P34096 147 aaKnown RBP8.8□□□□□ -1
PTPN2-201ENST00000309660 LINC01545Q5VT33 79 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 C9orf139Q6ZV77 190 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 IGKV3-20P01619 116 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 PRSS1P07477 247 aa8.8□□□□□ -1
PTPN2-201ENST00000309660 NDUFA4O00483 81 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 SETD2Q9BYW2 2564 aaPredicted RBP8.79□□□□□ -1
PTPN2-201ENST00000309660 U3KQE9 123 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 NMUP48645 174 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 DUX5Q96PT3 197 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 U3KQK5 164 aa8.79□□□□□ -1
PTPN2-201ENST00000309660 ANKRD39Q53RE8 183 aa8.78□□□□□ -1
PTPN2-201ENST00000309660 C19orf54Q5BKX5 351 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms