RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 H3BMG7 143 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 M0R381 172 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 H3BVH4 76 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 ATP5LO75964 103 aa11.41□□□□□ -0.58
CCNF-201ENST00000293968 WFDC2Q14508 124 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 S100A4P26447 101 aaKnown RBP11.4□□□□□ -0.58
CCNF-201ENST00000293968 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
CCNF-201ENST00000293968 ETDBQ3ZM63 59 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 SH2D6Q7Z4S9 175 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 CEND1Q8N111 149 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 SPTAN1Q13813 2472 aaKnown RBP11.4□□□□□ -0.58
CCNF-201ENST00000293968 LAGE3Q14657 143 aa11.4□□□□□ -0.58
CCNF-201ENST00000293968 MGPP08493 103 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 Q6ZQT7 251 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 NEGR1Q7Z3B1 354 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 AKAP13Q12802 2813 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
CCNF-201ENST00000293968 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 Q8N8P6 123 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 TSSC4Q9Y5U2 329 aaPredicted RBP11.39□□□□□ -0.59
CCNF-201ENST00000293968 J3QR89 54 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 VMO1Q7Z5L0 202 aa11.39□□□□□ -0.59
CCNF-201ENST00000293968 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 OR11H12B2RN74 326 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
CCNF-201ENST00000293968 AZU1P20160 251 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 PAX8Q06710 450 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 SCGB1D4Q6XE38 83 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 NPBQ8NG41 125 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 OR11H1Q8NG94 326 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 OR11H2Q8NH07 326 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 LINC00527Q9UJ94 153 aa11.38□□□□□ -0.59
CCNF-201ENST00000293968 IGKV3D-20A0A0C4DH25 116 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 G3V318 75 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 IGHG4P01861 327 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
CCNF-201ENST00000293968 ARL3P36405 182 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 LRBAP50851 2863 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 IGLL5B9A064 214 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 Q8NA96 180 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 ZNF502Q8TBZ5 544 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
CCNF-201ENST00000293968 SRSF1Q07955 248 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCNF-201ENST00000293968 A0A1B0GWB2 263 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCNF-201ENST00000293968 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 LOC107984156A0A0G2JMH3 177 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 ARL17AQ8IVW1 177 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 METTL26Q96S19 204 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 VKORC1Q9BQB6 163 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 PRTN3P24158 256 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 IGHV7-81A0A0B4J1V7 117 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 HIGD1BQ9P298 99 aa11.35□□□□□ -0.59
CCNF-201ENST00000293968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 GLMPQ8WWB7 406 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 CHTOPQ9Y3Y2 248 aaKnown RBP11.34□□□□□ -0.59
CCNF-201ENST00000293968 ATP6V0E1O15342 81 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 EMP1P54849 157 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 CCL21O00585 134 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 DEFB1P60022 68 aa11.34□□□□□ -0.59
CCNF-201ENST00000293968 IGHV3OR16-10A0A075B7F0 116 aa11.33□□□□□ -0.6
CCNF-201ENST00000293968 BUB3O43684 328 aa11.33□□□□□ -0.6
CCNF-201ENST00000293968 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.6
CCNF-201ENST00000293968 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
CCNF-201ENST00000293968 TGFAP01135 160 aa11.33□□□□□ -0.6
CCNF-201ENST00000293968 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
CCNF-201ENST00000293968 RAXQ9Y2V3 346 aa11.33□□□□□ -0.6
CCNF-201ENST00000293968 A0A087WX48 190 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 GAGE12HA6NDE8 117 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 ATRXP46100 2492 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 AGRNO00468 2067 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
CCNF-201ENST00000293968 ZNF418Q8TF45 676 aaPredicted RBP11.32□□□□□ -0.6
CCNF-201ENST00000293968 APOMO95445 188 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 IGF1P05019 195 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 H7C1H1 209 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 PLNP26678 52 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
CCNF-201ENST00000293968 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 PGPEP1Q9NXJ5 209 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 FOXC1Q12948 553 aa11.31□□□□□ -0.6
CCNF-201ENST00000293968 CD300EQ496F6 205 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms