RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 DLX4Q92988 240 aaPredicted RBP16.59■□□□□ 0.25
CCDC7-201ENST00000277657 XKRY2A2RUG3 117 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 DEFB1P60022 68 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 RAB4BP61018 213 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 FHL3Q13643 280 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 Q6AWC8 147 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 WFDC3Q8IUB2 231 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 C11orf44Q8N8P7 122 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 RAX2Q96IS3 184 aa16.59■□□□□ 0.25
CCDC7-201ENST00000277657 HBBP68871 147 aa16.58■□□□□ 0.24
CCDC7-201ENST00000277657 ZNF575Q86XF7 245 aa16.58■□□□□ 0.24
CCDC7-201ENST00000277657 CITED2Q99967 270 aaPredicted RBP16.58■□□□□ 0.24
CCDC7-201ENST00000277657 TSSC4Q9Y5U2 329 aaPredicted RBP16.58■□□□□ 0.24
CCDC7-201ENST00000277657 RPS20P60866 119 aaKnown RBP16.57■□□□□ 0.24
CCDC7-201ENST00000277657 FAM19A4Q96LR4 140 aa16.57■□□□□ 0.24
CCDC7-201ENST00000277657 F6UB75 175 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 HIST1H1AQ02539 215 aaPredicted RBP16.56■□□□□ 0.24
CCDC7-201ENST00000277657 LINC01559Q495D7 138 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 GFI1BQ5VTD9 330 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 TRBV7-9A0A0J9YWB2 115 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 HAX1O00165 279 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 CSN3P07498 182 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 CAMPP49913 170 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 PROK1P58294 105 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 HIST3H2BBQ8N257 126 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 RNF114Q9Y508 228 aa16.56■□□□□ 0.24
CCDC7-201ENST00000277657 TMSB15BA0A087X1C1 80 aa16.55■□□□□ 0.24
CCDC7-201ENST00000277657 IFITM10A6NMD0 228 aa16.55■□□□□ 0.24
CCDC7-201ENST00000277657 TFPI2P48307 235 aa16.55■□□□□ 0.24
CCDC7-201ENST00000277657 ZFAND2AQ8N6M9 145 aa16.55■□□□□ 0.24
CCDC7-201ENST00000277657 SETD2Q9BYW2 2564 aaPredicted RBP16.55■□□□□ 0.24
CCDC7-201ENST00000277657 A0A1B0GUT8 65 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 APCSP02743 223 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 AKR1D1P51857 326 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 SNRPD3P62318 126 aaKnown RBP16.54■□□□□ 0.24
CCDC7-201ENST00000277657 SLAQ13239 276 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 A0A1W2PRX2 142 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 CCL24O00175 119 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 TCF21O43680 179 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 ORM1P02763 201 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 ZNF688P0C7X2 276 aa16.54■□□□□ 0.24
CCDC7-201ENST00000277657 ARMS2P0C7Q2 107 aa16.53■□□□□ 0.24
CCDC7-201ENST00000277657 PAFAH1B2P68402 229 aa16.53■□□□□ 0.24
CCDC7-201ENST00000277657 PRR9Q5T870 116 aa16.53■□□□□ 0.24
CCDC7-201ENST00000277657 APRG1Q8IVJ8 170 aa16.53■□□□□ 0.24
CCDC7-201ENST00000277657 C11orf21Q9P2W6 132 aa16.53■□□□□ 0.24
CCDC7-201ENST00000277657 IGLC6P0CF74 106 aa16.52■□□□□ 0.24
CCDC7-201ENST00000277657 PSMG4Q5JS54 123 aa16.52■□□□□ 0.24
CCDC7-201ENST00000277657 FN1P02751 2386 aaKnown RBP16.52■□□□□ 0.23
CCDC7-201ENST00000277657 CRISP2P16562 243 aa16.52■□□□□ 0.23
CCDC7-201ENST00000277657 LYZL1Q6UWQ5 148 aa16.52■□□□□ 0.23
CCDC7-201ENST00000277657 TRAV2A0A0B4J234 112 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 IGKV3D-20A0A0C4DH25 116 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 A0A1B0GW15 77 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 CTRLP40313 264 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 RIGQ13278 110 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 KIAA1644Q3SXP7 199 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 GATD1Q8NB37 220 aa16.51■□□□□ 0.23
CCDC7-201ENST00000277657 SSBP4Q9BWG4 385 aaPredicted RBP16.51■□□□□ 0.23
CCDC7-201ENST00000277657 GRIFINA4D1Z8 144 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 TPPP3Q9BW30 176 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 CRLF1O75462 422 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 Q0VG73 95 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 PDZD11Q5EBL8 140 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 FER1L6-AS1Q8NA97 138 aa16.5■□□□□ 0.23
CCDC7-201ENST00000277657 A0A0J9YX75 114 aa16.49■□□□□ 0.23
CCDC7-201ENST00000277657 DEFB114Q30KQ6 69 aa16.49■□□□□ 0.23
CCDC7-201ENST00000277657 BORCS7Q96B45 105 aa16.49■□□□□ 0.23
CCDC7-201ENST00000277657 ADARB2-AS1A8MUL3 147 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 S100A8P05109 93 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 Q6ZQT7 251 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 TMEM61Q8N0U2 210 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 TP53TG3Q9ULZ0 132 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 A0A1B0GUS0 222 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 DYNLRB2Q8TF09 96 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 ODF3Q96PU9 254 aa16.48■□□□□ 0.23
CCDC7-201ENST00000277657 TRAV21A0A0B4J279 112 aa16.47■□□□□ 0.23
CCDC7-201ENST00000277657 GPX1P07203 203 aa16.47■□□□□ 0.23
CCDC7-201ENST00000277657 SRIP30626 198 aa16.47■□□□□ 0.23
CCDC7-201ENST00000277657 CNFNQ9BYD5 112 aa16.47■□□□□ 0.23
CCDC7-201ENST00000277657 SIGLEC8Q9NYZ4 499 aa16.47■□□□□ 0.23
CCDC7-201ENST00000277657 KLLNB2CW77 178 aa16.46■□□□□ 0.23
CCDC7-201ENST00000277657 OR10J3Q5JRS4 329 aa16.46■□□□□ 0.23
CCDC7-201ENST00000277657 TMEM256Q8N2U0 113 aa16.46■□□□□ 0.23
CCDC7-201ENST00000277657 S100A2P29034 98 aa16.46■□□□□ 0.22
CCDC7-201ENST00000277657 ZNF493Q6ZR52 646 aa16.46■□□□□ 0.22
CCDC7-201ENST00000277657 HIST1H2BLQ99880 126 aa16.46■□□□□ 0.22
CCDC7-201ENST00000277657 J3KRW8 73 aa16.45■□□□□ 0.22
CCDC7-201ENST00000277657 CD33P20138 364 aa16.45■□□□□ 0.22
CCDC7-201ENST00000277657 EBLN2Q6P2I7 272 aa16.45■□□□□ 0.22
CCDC7-201ENST00000277657 FOXI2Q6ZQN5 318 aa16.45■□□□□ 0.22
CCDC7-201ENST00000277657 F2Z2F3 143 aa16.44■□□□□ 0.22
CCDC7-201ENST00000277657 LINC00310P59036 64 aa16.44■□□□□ 0.22
CCDC7-201ENST00000277657 KIR3DS1Q14943 382 aa16.44■□□□□ 0.22
CCDC7-201ENST00000277657 LINC00518Q8N0U6 118 aa16.44■□□□□ 0.22
CCDC7-201ENST00000277657 ALKBH7Q9BT30 221 aaPredicted RBP16.44■□□□□ 0.22
CCDC7-201ENST00000277657 RNASE4P34096 147 aaKnown RBP16.44■□□□□ 0.22
CCDC7-201ENST00000277657 KRTAP10-3P60369 221 aa16.44■□□□□ 0.22
CCDC7-201ENST00000277657 CD300EQ496F6 205 aaPredicted RBP16.44■□□□□ 0.22
CCDC7-201ENST00000277657 LOC102724200A0A096LPH7 203 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms