RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 ETDBQ3ZM63 59 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 RNF5Q99942 180 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 ZNF815PA8K554 130 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 TEX22C9J3V5 150 aa13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
NDFIP1-201ENST00000253814 ZNF56Q15929 161 aa13.79□□□□□ -0.2
NDFIP1-201ENST00000253814 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
NDFIP1-201ENST00000253814 ADAMTS20P59510 1910 aa13.79□□□□□ -0.2
NDFIP1-201ENST00000253814 C3orf36Q3SXR2 165 aa13.79□□□□□ -0.2
NDFIP1-201ENST00000253814 MGAQ8IWI9 3026 aa13.79□□□□□ -0.2
NDFIP1-201ENST00000253814 RBX1P62877 108 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 KIR2DL4Q99706 377 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 A0A1W2PPM0 123 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 K7EP34 96 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 DTX2Q86UW9 622 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 CHD8Q9HCK8 2581 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 SIGMAR1Q99720 223 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 KAAG1Q9UBP8 84 aa13.78□□□□□ -0.2
NDFIP1-201ENST00000253814 IGHV3-64A0A075B6Q5 118 aa13.77□□□□□ -0.2
NDFIP1-201ENST00000253814 CRYGCP07315 174 aa13.77□□□□□ -0.2
NDFIP1-201ENST00000253814 IGFL3Q6UXB1 125 aa13.77□□□□□ -0.2
NDFIP1-201ENST00000253814 TLN2Q9Y4G6 2542 aa13.77□□□□□ -0.2
NDFIP1-201ENST00000253814 URB1-AS1Q96HZ7 61 aa13.77□□□□□ -0.21
NDFIP1-201ENST00000253814 SHISA9B4DS77 424 aa13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 NPIPB6E9PJ23 425 aa13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 LGALS3P17931 250 aaKnown RBP13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 USP9YO00507 2555 aaPredicted RBP13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 H3BMG7 143 aa13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 ATP6V0E1O15342 81 aa13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 HOXA3O43365 443 aaPredicted RBP13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 PRTN3P24158 256 aa13.76□□□□□ -0.21
NDFIP1-201ENST00000253814 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
NDFIP1-201ENST00000253814 BRD3OSQ6XYD6 125 aa13.75□□□□□ -0.21
NDFIP1-201ENST00000253814 PAX8Q06710 450 aa13.75□□□□□ -0.21
NDFIP1-201ENST00000253814 NEGR1Q7Z3B1 354 aa13.75□□□□□ -0.21
NDFIP1-201ENST00000253814 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
NDFIP1-201ENST00000253814 FXYD2P54710 66 aa13.74□□□□□ -0.21
NDFIP1-201ENST00000253814 PRAC2D3DTV9 90 aa13.74□□□□□ -0.21
NDFIP1-201ENST00000253814 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
NDFIP1-201ENST00000253814 SMPXQ9UHP9 88 aa13.74□□□□□ -0.21
NDFIP1-201ENST00000253814 CD7P09564 240 aa13.73□□□□□ -0.21
NDFIP1-201ENST00000253814 MYCNOSP40205 109 aa13.73□□□□□ -0.21
NDFIP1-201ENST00000253814 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
NDFIP1-201ENST00000253814 PGPEP1Q9NXJ5 209 aa13.73□□□□□ -0.21
NDFIP1-201ENST00000253814 SPTBN4Q9H254 2564 aa13.73□□□□□ -0.21
NDFIP1-201ENST00000253814 ORMDL2Q53FV1 153 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 TSSC4Q9Y5U2 329 aaPredicted RBP13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 TRAV21A0A0B4J279 112 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 TEX48A0A1B0GUV7 120 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 SAA4P35542 130 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 CRIP1P50238 77 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 FOXE3Q13461 319 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 PIP4P1Q86T03 277 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 CFHR4Q92496 578 aa13.72□□□□□ -0.21
NDFIP1-201ENST00000253814 ID1P41134 155 aa13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 SRSF8Q9BRL6 282 aaKnown RBP13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 TRBV25-1A0A075B6N4 114 aa13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 ZNF80P51504 273 aaPredicted RBP13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 C8orf31Q8N9H6 132 aa13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 AGPAT4-IT1Q9H0P7 198 aa13.71□□□□□ -0.21
NDFIP1-201ENST00000253814 A0A1B0GV72 72 aa13.71□□□□□ -0.22
NDFIP1-201ENST00000253814 H7C1H1 209 aa13.7□□□□□ -0.22
NDFIP1-201ENST00000253814 A0A087WWL8 130 aa13.7□□□□□ -0.22
NDFIP1-201ENST00000253814 SH2D6Q7Z4S9 175 aa13.7□□□□□ -0.22
NDFIP1-201ENST00000253814 Q8N8P6 123 aa13.7□□□□□ -0.22
NDFIP1-201ENST00000253814 CSTL1Q9H114 145 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 PTPRBP23467 1997 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 COL6A3P12111 3177 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 C8orf86Q6ZUL3 223 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 BOD1L2Q8IYS8 172 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 PLNP26678 52 aa13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
NDFIP1-201ENST00000253814 CEACAM4O75871 244 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 CTSGP08311 255 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 CRXO43186 299 aaPredicted RBP13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 DEFB1P60022 68 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 C7orf69Q9H7B7 122 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 CCDC168Q8NDH2 2452 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 DPF1Q92782 380 aa13.68□□□□□ -0.22
NDFIP1-201ENST00000253814 M0R1W7 72 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 TRAV2A0A0B4J234 112 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 IGLV2-11P01706 119 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 C2orf66Q6UXQ4 117 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 SLC25A16P16260 332 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 BOD1L1Q8NFC6 3051 aa13.67□□□□□ -0.22
NDFIP1-201ENST00000253814 F6UB75 175 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 BPESC1Q9GZL8 116 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 DPH3P1Q9H4G8 78 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 IGLV11-55A0A075B6I3 123 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 FCN3O75636 299 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 SUMO2P61956 95 aaKnown RBP13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 CEND1Q8N111 149 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
NDFIP1-201ENST00000253814 TNRC6BQ9UPQ9 1833 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms