RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
CNOT3-201ENST00000221232 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 RNF185Q96GF1 192 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 IGHV4-61A0A0C4DH41 118 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 UNQ9165/PRO28630Q6UXU0 137 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 U3KQK5 164 aa11.23□□□□□ -0.61
CNOT3-201ENST00000221232 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
CNOT3-201ENST00000221232 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 HBDP02042 147 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
CNOT3-201ENST00000221232 Q6ZS46 218 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 IFI27L1Q96BM0 104 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 SMAD7O15105 426 aaKnown RBP11.22□□□□□ -0.61
CNOT3-201ENST00000221232 SRD5A1P18405 259 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 LEPP41159 167 aa11.22□□□□□ -0.61
CNOT3-201ENST00000221232 NMUP48645 174 aa11.21□□□□□ -0.61
CNOT3-201ENST00000221232 PAX8Q06710 450 aa11.21□□□□□ -0.61
CNOT3-201ENST00000221232 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.61
CNOT3-201ENST00000221232 TNFRSF6BO95407 300 aa11.21□□□□□ -0.62
CNOT3-201ENST00000221232 KLK15Q9H2R5 256 aa11.21□□□□□ -0.62
CNOT3-201ENST00000221232 BLCAPP62952 87 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 PIFOQ8TCI5 191 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 ARL3P36405 182 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 MAP1LC3AQ9H492 121 aa11.2□□□□□ -0.62
CNOT3-201ENST00000221232 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 COX8AP10176 69 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 UBE2V1Q13404 147 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
CNOT3-201ENST00000221232 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 F6UB75 175 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 PRSS1P07477 247 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 PRR9Q5T870 116 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 C2orf91Q6ZV80 131 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 DEFB104AQ8WTQ1 72 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 NRGNQ92686 78 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 MOB4Q9Y3A3 225 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 FLNCQ14315 2725 aa11.19□□□□□ -0.62
CNOT3-201ENST00000221232 IGHV1-69DA0A0B4J2H0 117 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 TMEM238C9JI98 176 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 H3BVH4 76 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 IGHV1-69P01742 117 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 PF4V1P10720 104 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 PCP2Q8IVA1 136 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
CNOT3-201ENST00000221232 H3BUX3 64 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 KIR3DS1Q14943 382 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
CNOT3-201ENST00000221232 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 RAB9AP51151 201 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 TM4SF20Q53R12 229 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 C12orf54Q6X4T0 127 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 OR4C5Q8NGB2 326 aa11.18□□□□□ -0.62
CNOT3-201ENST00000221232 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
CNOT3-201ENST00000221232 CDKN1BP46527 198 aa11.17□□□□□ -0.62
CNOT3-201ENST00000221232 EDN2P20800 178 aa11.17□□□□□ -0.62
CNOT3-201ENST00000221232 HIST1H1AQ02539 215 aaPredicted RBP11.17□□□□□ -0.62
CNOT3-201ENST00000221232 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
CNOT3-201ENST00000221232 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
CNOT3-201ENST00000221232 M0R381 172 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 CCL19Q99731 98 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 IGHV4-30-2A0A087WSY4 118 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 ATP5J2P56134 94 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 POLQO75417 2590 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 CENPEQ02224 2701 aa11.16□□□□□ -0.62
CNOT3-201ENST00000221232 C7orf71A4D174 169 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 CIDEAO60543 219 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 LGALS9BQ3B8N2 356 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 LGALS9CQ6DKI2 356 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 TMEM95Q3KNT9 176 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 DEFB125Q8N687 156 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 VPS25Q9BRG1 176 aa11.15□□□□□ -0.62
CNOT3-201ENST00000221232 USP9YO00507 2555 aaPredicted RBP11.15□□□□□ -0.62
CNOT3-201ENST00000221232 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 FOXC2Q99958 501 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 PRORYQ9H606 182 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 FGF6P10767 208 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 TMEM97Q5BJF2 176 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
CNOT3-201ENST00000221232 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms