RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CRYBA4P53673 196 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 DEFA1P59665 94 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 DEFA3P59666 94 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 IGFL4Q6B9Z1 124 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 CYP2G1PQ6ZSU1 146 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 BPIFA4PQ86YQ2 179 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 Q8N814 137 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 TXNDC17Q9BRA2 123 aa5.85□□□□□ -1.47
SMAD4-215ENST00000592911 LINC00854A0A1B0GVQ3 168 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 SYNGR2O43760 224 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 CRYGDP07320 174 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 LINC00869P0C866 280 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 SRIP30626 198 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 LAGE3Q14657 143 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 LYZL2Q7Z4W2 148 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 EIF4E3Q8N5X7 224 aaKnown RBP5.84□□□□□ -1.47
SMAD4-215ENST00000592911 ZNF431Q8TF32 576 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-215ENST00000592911 SMIM4Q8WVI0 70 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 PCNPQ8WW12 178 aaKnown RBP5.84□□□□□ -1.47
SMAD4-215ENST00000592911 MRPL32Q9BYC8 188 aaKnown RBP5.84□□□□□ -1.47
SMAD4-215ENST00000592911 EXTL2Q9UBQ6 330 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 HHLA3Q9XRX5 114 aa5.84□□□□□ -1.47
SMAD4-215ENST00000592911 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
SMAD4-215ENST00000592911 TRGV1A0A0A0MS02 117 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 TRBV7-9A0A0J9YWB2 115 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 PMS2P5A8MQ11 134 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 KLLNB2CW77 178 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 CCNKO75909 580 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 FUSP35637 526 aaKnown RBP eCLIP5.83□□□□□ -1.48
SMAD4-215ENST00000592911 TGFBR1P36897 503 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 ZFP69Q49AA0 526 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 LINC01556Q5JQF7 62 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 MORN5Q5VZ52 161 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 ARV1Q9H2C2 271 aa5.83□□□□□ -1.48
SMAD4-215ENST00000592911 STRAPQ9Y3F4 350 aaKnown RBP5.83□□□□□ -1.48
SMAD4-215ENST00000592911 TRAV12-3A0A0B4J271 114 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 C7orf71A4D174 169 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 IBA57-AS1B1ANH7 110 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 C9JCJ5 164 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 WRBO00258 174 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 OR5G3P0C626 314 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 CRISP2P16562 243 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 ANXA7P20073 488 aaKnown RBP5.82□□□□□ -1.48
SMAD4-215ENST00000592911 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-215ENST00000592911 ACOT6Q3I5F7 207 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-215ENST00000592911 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 TMEM182Q6ZP80 229 aaPredicted RBP5.82□□□□□ -1.48
SMAD4-215ENST00000592911 ZNF546Q86UE3 836 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 ENKURQ8TC29 256 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 DEDD2Q8WXF8 326 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 GGACTQ9BVM4 153 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 TM2D2Q9BX73 214 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 NPVFQ9HCQ7 196 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 GSN-AS1Q9NRJ2 163 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 MBD2Q9UBB5 411 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 TP53TG3Q9ULZ0 132 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 TNFRSF18Q9Y5U5 241 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
SMAD4-215ENST00000592911 IGHV3-38A0A0C4DH36 116 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 K7EQD1 137 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 RS1O15537 224 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 MPDU1O75352 247 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 UPK1BO75841 260 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 CT45A10P0DMU9 189 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 IGLC2P0DOY2 106 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 IAPPP10997 89 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 LSM3P62310 102 aaKnown RBP5.81□□□□□ -1.48
SMAD4-215ENST00000592911 CD300CQ08708 224 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 PDE6HQ13956 83 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 FHL2Q14192 279 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 OR10G4Q8NGN3 311 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 SAT2Q96F10 170 aaPredicted RBP5.81□□□□□ -1.48
SMAD4-215ENST00000592911 FAM19A4Q96LR4 140 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 SH3BGRL3Q9H299 93 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 KLF12Q9Y4X4 402 aa5.81□□□□□ -1.48
SMAD4-215ENST00000592911 ANKRD20A5PA0PJZ0 165 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 OR4E1P0C645 316 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 FAUP35544 74 aaKnown RBP5.8□□□□□ -1.48
SMAD4-215ENST00000592911 NCS1P62166 190 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 SPANXN5Q5MJ07 72 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 LINC00305Q7Z4B0 112 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 WFDC10BQ8IUB3 73 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 RASL10AQ92737 203 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 FUNDC2Q9BWH2 189 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 ARL6Q9H0F7 186 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 RCL1Q9Y2P8 373 aaKnown RBP5.8□□□□□ -1.48
SMAD4-215ENST00000592911 COX11Q9Y6N1 276 aa5.8□□□□□ -1.48
SMAD4-215ENST00000592911 TRGV4A0A0C4DH28 118 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 CIDEAO60543 219 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 PRAF2O60831 178 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 IGLV2-8P01709 118 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 TAS2R30P59541 319 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 UBE2MP61081 183 aaKnown RBP5.79□□□□□ -1.48
SMAD4-215ENST00000592911 SSTP61278 116 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 FAAP20Q6NZ36 180 aa5.79□□□□□ -1.48
SMAD4-215ENST00000592911 PATE2Q6UY27 113 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms