RNA–Protein interactions for RNA: ENST00000568733.5

NUB1-212, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUB1, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-212ENST00000568733 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
NUB1-212ENST00000568733 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
NUB1-212ENST00000568733 RPL7P18124 248 aaKnown RBP9.96□□□□□ -0.81
NUB1-212ENST00000568733 CENPWQ5EE01 88 aa9.96□□□□□ -0.81
NUB1-212ENST00000568733 BAGE2Q86Y30 109 aa9.96□□□□□ -0.81
NUB1-212ENST00000568733 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.81
NUB1-212ENST00000568733 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.81
NUB1-212ENST00000568733 SMPXQ9UHP9 88 aa9.96□□□□□ -0.81
NUB1-212ENST00000568733 IGHV7-4-1A0A0J9YVY3 117 aa9.96□□□□□ -0.82
NUB1-212ENST00000568733 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.82
NUB1-212ENST00000568733 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
NUB1-212ENST00000568733 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 RAB4BP61018 213 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 LCN12Q6JVE5 192 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 OCC1Q8TAD7 63 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 ZNF414Q96IQ9 312 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 RNF24Q9Y225 148 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 H3BRN7 92 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 GP9P14770 177 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 NIPSNAP3BQ9BS92 247 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
NUB1-212ENST00000568733 FOXL1Q12952 345 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 KLK9Q9UKQ9 250 aa9.95□□□□□ -0.82
NUB1-212ENST00000568733 ORM1P02763 201 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 HOXA5P20719 270 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 DEFB125Q8N687 156 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 WI2-2373I1.2A0A1W2PRP0 233 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 FRMD6-AS1P0C7T7 363 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
NUB1-212ENST00000568733 CSN1S1P47710 185 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 GNG4P50150 75 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 GAR1Q9NY12 217 aaKnown RBP9.94□□□□□ -0.82
NUB1-212ENST00000568733 TRBV19A0A075B6N1 114 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 NDUFA4O00483 81 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 TMEM208Q9BTX3 173 aa9.94□□□□□ -0.82
NUB1-212ENST00000568733 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 MBD3L1Q8WWY6 194 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 GRAMD2BQ96HH9 432 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 A0A1W2PPQ1 181 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 INS-IGF2F8WCM5 200 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 SRSF8Q9BRL6 282 aaKnown RBP9.93□□□□□ -0.82
NUB1-212ENST00000568733 TMEM167BQ9NRX6 74 aa9.93□□□□□ -0.82
NUB1-212ENST00000568733 CAMPP49913 170 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 NRN1Q9NPD7 142 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 PEX7O00628 323 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 TUBA4BQ9H853 241 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 EPDR1Q9UM22 224 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 GCGP01275 180 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 CXCL1P09341 107 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 BMI1P35226 326 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
NUB1-212ENST00000568733 C4orf3Q8WVX3 66 aa9.92□□□□□ -0.82
NUB1-212ENST00000568733 G3V4G9 280 aa9.91□□□□□ -0.82
NUB1-212ENST00000568733 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
NUB1-212ENST00000568733 MRPL54Q6P161 138 aaKnown RBP9.91□□□□□ -0.82
NUB1-212ENST00000568733 LINC00322Q6ZN03 302 aaPredicted RBP9.91□□□□□ -0.82
NUB1-212ENST00000568733 TMEM86BQ8N661 226 aa9.91□□□□□ -0.82
NUB1-212ENST00000568733 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
NUB1-212ENST00000568733 TGIF2-C20orf24A0A0A6YYL0 155 aa9.91□□□□□ -0.82
NUB1-212ENST00000568733 FABP4P15090 132 aa9.91□□□□□ -0.82
NUB1-212ENST00000568733 A0A1W2PS18 150 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 ADARB2-AS1A8MUL3 147 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 KLF5Q13887 457 aaPredicted RBP9.9□□□□□ -0.82
NUB1-212ENST00000568733 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 TCRAP04437 139 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 DDTP30046 118 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
NUB1-212ENST00000568733 RHEBQ15382 184 aa9.9□□□□□ -0.83
NUB1-212ENST00000568733 GPHB5Q86YW7 130 aa9.9□□□□□ -0.83
NUB1-212ENST00000568733 CLUHP3Q96NS8 147 aa9.9□□□□□ -0.83
NUB1-212ENST00000568733 AGPAT4-IT1Q9H0P7 198 aa9.9□□□□□ -0.83
NUB1-212ENST00000568733 ZNF705GA8MUZ8 300 aaPredicted RBP9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BKO60814 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 TRGC2P03986 189 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BJP06899 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 GPX1P07203 203 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BOP23527 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BBP33778 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
NUB1-212ENST00000568733 REC114Q7Z4M0 266 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 ZNF331Q9NQX6 463 aaPredicted RBP9.89□□□□□ -0.83
NUB1-212ENST00000568733 IGLC2P0DOY2 106 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 FRZBQ92765 325 aa9.89□□□□□ -0.83
NUB1-212ENST00000568733 DAZAP1Q96EP5 407 aaKnown RBP9.89□□□□□ -0.83
NUB1-212ENST00000568733 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
NUB1-212ENST00000568733 TRAV8-2A0A0B4J237 113 aa9.88□□□□□ -0.83
NUB1-212ENST00000568733 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
NUB1-212ENST00000568733 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms