RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 IGFL4Q6B9Z1 124 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 C10orf99Q6UWK7 81 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 PRNTQ86SH4 94 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 ASCL2Q99929 193 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 ITPR3Q14573 2671 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 TCL1AP56279 114 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 UNQ9165/PRO28630Q6UXU0 137 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 FAM231DQ6ZW35 169 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 OR4X2Q8NGF9 303 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 SMIM12Q96EX1 92 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 ZC2HC1AQ96GY0 325 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 METTL26Q96S19 204 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 AAMDCQ9H7C9 122 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF580Q9UK33 172 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 SNURFLB1AK76 121 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 CDKN1BP46527 198 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 PSG9Q00887 426 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 UBE2V1Q13404 147 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 TMEM75Q8N9X5 138 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 RCHY1Q96PM5 261 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 DUX5Q96PT3 197 aa7.23□□□□□ -1.25
LINC00838-201ENST00000562956 SMIM27A0A1W2PRY6 76 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 IGHG4P01861 327 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 PSMB8P28062 276 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 HLA-DMBP28068 263 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 NRN1Q9NPD7 142 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 U3KQE9 123 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 A0A0G2JLM5 398 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 IGLC3P0DOY3 106 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 PAFAH1B2P68402 229 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 PSG3Q16557 428 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 OR4B1Q8NGF8 309 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 TMEM190Q8WZ59 177 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF331Q9NQX6 463 aaPredicted RBP7.22□□□□□ -1.25
LINC00838-201ENST00000562956 UQCR10Q9UDW1 63 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
LINC00838-201ENST00000562956 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 TRBV6-1A0A0K0K1D8 114 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF785A8K8V0 405 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF738Q8NE65 137 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF702PQ9H963 129 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 PSG8Q9UQ74 426 aa7.21□□□□□ -1.25
LINC00838-201ENST00000562956 GCN1Q92616 2671 aaKnown RBP7.21□□□□□ -1.25
LINC00838-201ENST00000562956 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 IGKV2-40A0A087WW87 121 aaPredicted RBP7.21□□□□□ -1.26
LINC00838-201ENST00000562956 A0A087X0K7 114 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 K7EQM0 130 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 NDUFA4O00483 81 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 ZNF253O75346 499 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 IGKV2D-40P01614 121 aaPredicted RBP7.21□□□□□ -1.26
LINC00838-201ENST00000562956 COX11Q9Y6N1 276 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 UNC79Q9P2D8 2635 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 C19orf71A6NCJ1 209 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 CSN1S1P47710 185 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 Q8N976 141 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 ORAOV1Q8WV07 137 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 GRAMD2BQ96HH9 432 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 PRSS22Q9GZN4 317 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 NAT8BQ9UHF3 227 aa7.21□□□□□ -1.26
LINC00838-201ENST00000562956 ITPR2Q14571 2701 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 CHEK1O14757 476 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
LINC00838-201ENST00000562956 RNF182Q8N6D2 247 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 NPFFR1Q9GZQ6 430 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 GPX1P07203 203 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 RIPPLY3P57055 190 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 FOXC2Q99958 501 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
LINC00838-201ENST00000562956 P01737 135 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 TSPOP30536 169 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 CTRLP40313 264 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
LINC00838-201ENST00000562956 C16orf54Q6UWD8 224 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 TSKUQ8WUA8 353 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 RPP21Q9H633 154 aaKnown RBP7.19□□□□□ -1.26
LINC00838-201ENST00000562956 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
LINC00838-201ENST00000562956 IZUMO1RA6ND01 250 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 NUP35Q8NFH5 326 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 GLMPQ8WWB7 406 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 DAZAP1Q96EP5 407 aaKnown RBP7.19□□□□□ -1.26
LINC00838-201ENST00000562956 VGLL1Q99990 258 aa7.19□□□□□ -1.26
LINC00838-201ENST00000562956 FLNAP21333 2647 aaKnown RBP7.18□□□□□ -1.26
LINC00838-201ENST00000562956 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 SERTM2A0A1B0GWG4 89 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 HIGD1CA8MV81 97 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 PRAC2D3DTV9 90 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 CRIP1P50238 77 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 TMEM89A2RUT3 159 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 NPIPB6E9PJ23 425 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 SRIP30626 198 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 TCF24Q7RTU0 167 aa7.18□□□□□ -1.26
LINC00838-201ENST00000562956 Q8TAT8 98 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms