RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 BCL9O00512 1426 aa0.86□□□□□ -2.27
USP8-211ENST00000560527 TRAPPC8Q9Y2L5 1435 aa0.86□□□□□ -2.27
USP8-211ENST00000560527 NUP210LQ5VU65 1888 aa0.86□□□□□ -2.27
USP8-211ENST00000560527 NCAPD3P42695 1498 aa0.86□□□□□ -2.27
USP8-211ENST00000560527 CCDC168Q8NDH2 2452 aa0.86□□□□□ -2.27
USP8-211ENST00000560527 RTL9Q8NET4 1388 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 TRBV6-7A0A0A0MS04 114 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 IGHV1-58A0A0C4DH39 117 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 LOC107984640A0A0U1RRK4 108 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 C9orf170A2RU37 121 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 CCL16O15467 120 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 ERC2-IT1O76042 136 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 FAM107AO95990 144 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 SMARCA2P51531 1590 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 S100A12P80511 92 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 SMCO1Q147U7 214 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 SPRNQ5BIV9 151 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 LINC00305Q7Z4B0 112 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 LRRC18Q8N456 261 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 OR5H6Q8NGV6 325 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 SKA2Q8WVK7 121 aaPredicted RBP0.85□□□□□ -2.27
USP8-211ENST00000560527 PATE1Q8WXA2 126 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 OBSCN-AS1Q96MR7 158 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 TP53RKQ96S44 253 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 TCEAL2Q9H3H9 227 aaPredicted RBP0.85□□□□□ -2.27
USP8-211ENST00000560527 HSPB11Q9Y547 144 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 EPPK1P58107 5090 aaKnown RBP0.85□□□□□ -2.27
USP8-211ENST00000560527 GAPVD1Q14C86 1478 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 NUP98P52948 1817 aa0.85□□□□□ -2.27
USP8-211ENST00000560527 ARHGEF10O15013 1369 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 MYO9AB2RTY4 2548 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 ANKHD1Q8IWZ3 2542 aaKnown RBP0.84□□□□□ -2.27
USP8-211ENST00000560527 C2CD3Q4AC94 2353 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 MKI67P46013 3256 aaKnown RBP0.84□□□□□ -2.27
USP8-211ENST00000560527 N4BP2Q86UW6 1770 aaPredicted RBP0.84□□□□□ -2.27
USP8-211ENST00000560527 A0A087WSZ3 146 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 M0QZK8 103 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 HMGN1P05114 100 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 CXCL8P10145 99 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 SCGB1A1P11684 91 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 ZNF25P17030 456 aaPredicted RBP0.84□□□□□ -2.27
USP8-211ENST00000560527 PSPHP78330 225 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 CCDC153Q494R4 210 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 KRTAP26-1Q6PEX3 210 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 C2orf82Q6UX34 121 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 ARPINQ7Z6K5 226 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 LZICQ8WZA0 190 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 PRELID3AQ96N28 172 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 TMEM138Q9NPI0 162 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 CBLN4Q9NTU7 201 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 FKBP11Q9NYL4 201 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 GSKIPQ9P0R6 139 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 ZFP30Q9Y2G7 519 aa0.84□□□□□ -2.27
USP8-211ENST00000560527 TRPM1Q7Z4N2 1603 aa0.84□□□□□ -2.28
USP8-211ENST00000560527 ALKQ9UM73 1620 aa0.84□□□□□ -2.28
USP8-211ENST00000560527 MCM3APO60318 1980 aa0.84□□□□□ -2.28
USP8-211ENST00000560527 XIRP1Q702N8 1843 aaKnown RBP0.84□□□□□ -2.28
USP8-211ENST00000560527 NUP210Q8TEM1 1887 aaPredicted RBP0.84□□□□□ -2.28
USP8-211ENST00000560527 MYO5AQ9Y4I1 1855 aaKnown RBP0.84□□□□□ -2.28
USP8-211ENST00000560527 MAPKBP1O60336 1514 aa0.84□□□□□ -2.28
USP8-211ENST00000560527 NISCHQ9Y2I1 1504 aa0.84□□□□□ -2.28
USP8-211ENST00000560527 NWD1Q149M9 1564 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 KMT2CQ8NEZ4 4911 aaKnown RBP0.83□□□□□ -2.28
USP8-211ENST00000560527 LAMB4A4D0S4 1761 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 TNS3Q68CZ2 1445 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 VIRMAQ69YN4 1812 aaKnown RBP0.83□□□□□ -2.28
USP8-211ENST00000560527 TRAV27A0A087WT01 109 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 TRAV13-1A0A0B4J241 112 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 TRBV27A0A0K0K1C4 114 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 TRBV6-4A0A1B0GX49 114 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 J3KT08 172 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 INE1O15225 51 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 CCL25O15444 150 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 LYRM1O43325 122 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 DNAL4O96015 105 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 FABP4P15090 132 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 FOXA3P55318 350 aaPredicted RBP0.83□□□□□ -2.28
USP8-211ENST00000560527 NDUFA6P56556 154 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 CKS1BP61024 79 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 PRB3Q04118 309 aaPredicted RBP0.83□□□□□ -2.28
USP8-211ENST00000560527 OR8B8Q15620 311 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 VMA21Q3ZAQ7 101 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 FAM74A1Q5RGS3 127 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 GKN2Q86XP6 184 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 TMEM229BQ8NBD8 167 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 OR4B1Q8NGF8 309 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 BORCS5Q969J3 196 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 LINC00052Q96N35 136 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 LXNQ9BS40 222 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 JPT1Q9UK76 154 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
USP8-211ENST00000560527 CFAP46Q8IYW2 2715 aa0.83□□□□□ -2.28
USP8-211ENST00000560527 EHBP1L1Q8N3D4 1523 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 287.7 ms